RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 GSTT1P30711 240 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 HOXD12P35452 270 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 PSMD7P51665 324 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 NEK3P51956 506 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 LRRC63Q05C16 580 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 KLRC3Q07444 240 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 DRAP1Q14919 205 aaPredicted RBP10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 SUSD4Q5VX71 490 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 EPM2AIP1Q7L775 607 aaPredicted RBP10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 SFR1Q86XK3 245 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 VGLL2Q8N8G2 317 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 WDR60Q8WVS4 1066 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 FAM84AQ96KN4 292 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 NAP1L3Q99457 506 aaPredicted RBP10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 POLR3CQ9BUI4 534 aaPredicted RBP10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 STMN4Q9H169 189 aaPredicted RBP10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 PCIF1Q9H4Z3 704 aa10.76□□□□□ -0.69
PDGFRB-207ENST00000520579 PIK3C2AO00443 1686 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 KCNA2P16389 499 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 MRPS35P82673 323 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PICALMQ13492 652 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 RIPK1Q13546 671 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 THOC5Q13769 683 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 TMEM53Q6P2H8 277 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 IRF2BP2Q7Z5L9 587 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 ZNF713Q8N859 430 aaPredicted RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 LRRC57Q8N9N7 239 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 SH2D3AQ9BRG2 576 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PKD2L1Q9P0L9 805 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 ZFP69BQ9UJL9 534 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PHF24Q9UPV7 400 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 MYH2Q9UKX2 1941 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 A6NHS1 94 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 LCA5LO95447 670 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 GYS1P13807 737 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PON1P27169 355 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 CDR2Q01850 454 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 IKQ13123 557 aaPredicted RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 SEPT2Q15019 361 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 FAM117BQ6P1L5 589 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 SYCE1Q8N0S2 351 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 FAM161BQ96MY7 647 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 ARHGEF3Q9NR81 526 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 DDX18Q9NVP1 670 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 CYP39A1Q9NYL5 469 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 DNAJC12Q9UKB3 198 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 MYH7P12883 1935 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 FMN2Q9NZ56 1722 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 UNC5CO95185 931 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 IFNB1P01574 187 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PLA2G4BP0C869 781 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 KITP10721 976 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 ZYXQ15942 572 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 EFCAB3Q8N7B9 438 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PRELID2Q8N945 189 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 SLC30A5Q8TAD4 765 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 LNX1Q8TBB1 728 aaPredicted RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 SUCLA2Q9P2R7 463 aaPredicted RBP10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 TMEM59LQ9UK28 342 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PHTF1Q9UMS5 762 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 MYH1P12882 1939 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 MEGF6O75095 1541 aa10.75□□□□□ -0.69
PDGFRB-207ENST00000520579 PYGMP11217 842 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CETPP11597 493 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 COMTP21964 271 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CETN2P41208 172 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 NEK2P51955 445 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 INHBCP55103 352 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 KRT17Q04695 432 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 MCL1Q07820 350 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 PPP2R5CQ13362 524 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 DUPD1Q68J44 220 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 VSTM1Q6UX27 236 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 KRT25Q7Z3Z0 450 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 UBE2Q1Q7Z7E8 422 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SMYD1Q8NB12 490 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CEP70Q8NHQ1 597 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CLPTM1LQ96KA5 538 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 RAB34Q9BZG1 259 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CARD9Q9H257 536 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SMYD3Q9H7B4 428 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 IL17RBQ9NRM6 502 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 ARHGEF38Q9NXL2 777 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 MARCOQ9UEW3 520 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 PCDHA12Q9UN75 941 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SH3GLB1Q9Y371 365 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 C4AP0C0L4 1744 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 C4BP0C0L5 1744 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L5A8MUK1 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L15C9J2P7 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L13C9JLJ4 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L11C9JVI0 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L18D6R9N7 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L22D6RA61 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L17D6RBQ6 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L19D6RCP7 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L20D6RJB6 530 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms