RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 KCNQ5Q9NR82 932 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 TYW1Q9NV66 732 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 KCND2Q9NZV8 630 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 CNTN3Q9P232 1028 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 HDAC6Q9UBN7 1215 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 SEL1LQ9UBV2 794 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 HERC5Q9UII4 1024 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 ADAM21Q9UKJ8 722 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 INTUQ9ULD6 942 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 PCDHA1Q9Y5I3 950 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 BZW2Q9Y6E2 419 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 CAPN6Q9Y6Q1 641 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 IGLV3-22A0A075B6J6 115 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 A0A0A6YYK5 440 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 LRRIQ3A6PVS8 624 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 F5H6K3 240 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 TRAF5O00463 557 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 ENC1O14682 589 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 TM4SF5O14894 197 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 MSH4O15457 936 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 CALUO43852 315 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 ECE2O60344 883 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 SYF2O95926 243 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 TFRCP02786 760 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 PLEKP08567 350 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 RHOXF2BP0C7M4 288 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 ZBTB48P10074 688 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 MYBP10242 640 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 EPB41P11171 864 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 BMP3P12645 472 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 IDEP14735 1019 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 HOXD13P35453 343 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 SLC16A2P36021 539 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 ZNF131P52739 623 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 NPEPPSP55786 919 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 EIF6P56537 245 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 JAM2P57087 298 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 CYP27A1Q02318 531 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 KLRC3Q07444 240 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 ELOAQ14241 798 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 EPHA7Q15375 998 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 KNOP1Q1ED39 458 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 ABCB5Q2M3G0 1257 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 HERC4Q5GLZ8 1057 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 TMEM164Q5U3C3 297 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 RNF43Q68DV7 783 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 CCDC70Q6NSX1 233 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 EMBQ6PCB8 327 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 USP17L6PQ6QN14 398 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 RRAGAQ7L523 313 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 KRT26Q7Z3Y9 468 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 ZNF438Q7Z4V0 828 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 IRF2BP2Q7Z5L9 587 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 FMNL3Q8IVF7 1028 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 CNPY4Q8N129 248 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 MREGQ8N565 214 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 SAMD3Q8N6K7 520 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 SUPT20HQ8NEM7 779 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 SPATA4Q8NEY3 305 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.51□□□□□ -1.53
SDC2-204ENST00000519914 SLC5A5Q92911 643 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 NOX5Q96PH1 765 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 SH3GL2Q99962 352 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 HSD17B14Q9BPX1 270 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 RHOXF2Q9BQY4 288 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 LSM14BQ9BX40 385 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 FGFBP2Q9BYJ0 223 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 TMX4Q9H1E5 349 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 VPS33BQ9H267 617 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 RANBP17Q9H2T7 1088 aaKnown RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 ZSWIM4Q9H7M6 989 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 MMRN2Q9H8L6 949 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 FAM207AQ9NSI2 230 aaPredicted RBP5.51□□□□□ -1.53
SDC2-204ENST00000519914 SEPT3Q9UH03 358 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 SALL4Q9UJQ4 1053 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 TMEM59LQ9UK28 342 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 HPCAL4Q9UM19 191 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 DNM3Q9UQ16 869 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 TMX2Q9Y320 296 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 RABGAP1Q9Y3P9 1069 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.51□□□□□ -1.53
SDC2-204ENST00000519914 DUSP10Q9Y6W6 482 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 WDR81Q562E7 1941 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 ASTN1O14525 1302 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 FRMPD4Q14CM0 1322 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 PARP14Q460N5 1801 aa5.51□□□□□ -1.53
SDC2-204ENST00000519914 A6NHS1 94 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 FAM86B1E9PN63 330 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 F8W031 263 aaPredicted RBP5.5□□□□□ -1.53
SDC2-204ENST00000519914 MPHOSPH10O00566 681 aaKnown RBP5.5□□□□□ -1.53
SDC2-204ENST00000519914 PMM2O15305 246 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 AKR1B10O60218 316 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 MARCH6O60337 910 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 SHOX2O60902 331 aaPredicted RBP5.5□□□□□ -1.53
SDC2-204ENST00000519914 SRGAP2O75044 1071 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 PSMD10O75832 226 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 TRIM37O94972 964 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 KIF4AO95239 1232 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 MOCS3O95396 460 aa5.5□□□□□ -1.53
SDC2-204ENST00000519914 AFPP02771 609 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms