RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TMX1Q9H3N1 280 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 TLE6Q9H808 572 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 TOMM22Q9NS69 142 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 LRFN2Q9ULH4 789 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 NOVA2Q9UNW9 492 aaKnown RBP6.93□□□□□ -1.3
PABPC1-207ENST00000518716 DMXL1Q9Y485 3027 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 PLXNA4Q9HCM2 1894 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 MAP1BP46821 2468 aaKnown RBP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 DOCK5Q9H7D0 1870 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 CACNA1IQ9P0X4 2223 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 GSTTP1A0A1W2PQM5 241 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 FSD2A1L4K1 749 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 ZBTB5O15062 677 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 PARP1P09874 1014 aaKnown RBP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 NPR3P17342 541 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 MX1P20591 662 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 CD52P31358 61 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 GATMP50440 423 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 CLCN5P51795 746 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 HNRNPUQ00839 825 aaKnown RBP eCLIP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 CCDC178Q5BJE1 867 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 FDX2Q6P4F2 183 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 FAM43BQ6ZT52 329 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 FRMD5Q7Z6J6 570 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 TREML1Q86YW5 311 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 ADSSL1Q8N142 457 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 AGBL5Q8NDL9 886 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 OR13H1Q8NG92 308 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 DNAJB3Q8WWF6 145 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 ESR2Q92731 530 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 NKD2Q969F2 451 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 NEK1Q96PY6 1258 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 PLCD4Q9BRC7 762 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 FTHL17Q9BXU8 183 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 SMOC2Q9H3U7 446 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 RNF41Q9H4P4 317 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 RIOX1Q9H6W3 641 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 VAT1LQ9HCJ6 419 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 ZSWIM5Q9P217 1185 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 MAD2L2Q9UI95 211 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 PADI3Q9ULW8 664 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 SORCS3Q9UPU3 1222 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 LZTS1Q9Y250 596 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 PCDHA1Q9Y5I3 950 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 CDY2AQ9Y6F7 541 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 CCDC171Q6TFL3 1326 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 IGSF9BQ9UPX0 1349 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 KDM3AQ9Y4C1 1321 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 FNDC1Q4ZHG4 1894 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-207ENST00000518716 CHD6Q8TD26 2715 aa6.92□□□□□ -1.3
PABPC1-207ENST00000518716 MED19A0JLT2 244 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 KLRF2D3W0D1 207 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 GCOM1H8Y6P7 765 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 NOP56O00567 594 aaKnown RBP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 FIBPO43427 364 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 CYTH3O43739 400 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 MGEA5O60502 916 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 ATP9AO75110 1047 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 SMNDC1O75940 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 FGF18O76093 207 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 CSPG5O95196 566 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 ATG7O95352 703 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 KCNA2P16389 499 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 HOXB8P17481 243 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 FAM189BP81408 668 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 MRPS6P82932 125 aaKnown RBP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 PLCB3Q01970 1234 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 SEC23AQ15436 765 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 CWF19L1Q69YN2 538 aaKnown RBP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 STK32AQ8WU08 396 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 RMDN1Q96DB5 314 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 ZBTB10Q96DT7 871 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 PCYT2Q99447 389 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 CWH43Q9H720 699 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 TUBE1Q9UJT0 475 aa6.91□□□□□ -1.3
PABPC1-207ENST00000518716 ZNF215Q9UL58 517 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-207ENST00000518716 LOXHD1Q8IVV2 1947 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 HIDE1A8MVS5 230 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 C2CD4DB7Z1M9 353 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 C9IYK1 514 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 CYP26A1O43174 497 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
PABPC1-207ENST00000518716 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
PABPC1-207ENST00000518716 STAG3L1P0CL83 205 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 SCG2P13521 617 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 TECP42680 631 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 SARSP49591 514 aaKnown RBP6.9□□□□□ -1.3
PABPC1-207ENST00000518716 PDE1AP54750 535 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 DPYDQ12882 1025 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 PPFIA1Q13136 1202 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-207ENST00000518716 MTMR3Q13615 1198 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 GNPTABQ3T906 1256 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
PABPC1-207ENST00000518716 UTP14CQ5TAP6 766 aaKnown RBP6.9□□□□□ -1.3
PABPC1-207ENST00000518716 PCNX4Q63HM2 1172 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms