RNA–Protein interactions for RNA: ENST00000517910.1

AP003356.1-202, humanhuman

TSL 2 BASIC

Gene AP003356.1, Length 2,770 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003356.1-202ENST00000517910 NEK3P51956 506 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 SPARCL1Q14515 664 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 TRIP13Q15645 432 aaPredicted RBP20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 KNOP1Q1ED39 458 aaKnown RBP20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 RHBDF2Q6PJF5 856 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 USP17L2Q6R6M4 530 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 RHOT2Q8IXI1 618 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 NCSTNQ92542 709 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 KRT82Q9NSB4 513 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 LARSQ9P2J5 1176 aaKnown RBP20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 SLC4A7Q9Y6M7 1214 aa20.8■□□□□ 0.92
AP003356.1-202ENST00000517910 PENKP01210 267 aaPredicted RBP20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 RTP1P59025 263 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 GSTA3Q16772 222 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 RNF207Q6ZRF8 634 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 C1orf54Q8WWF1 131 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 SYNCQ9H7C4 482 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 SAR1AQ9NR31 198 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 TMCO1Q9UM00 188 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 ACTL7BQ9Y614 415 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 EXOC3O60645 756 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 CCDC22O60826 627 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 ITGA8P53708 1063 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 SLC45A4Q5BKX6 768 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 ACBD5Q5T8D3 534 aaPredicted RBP20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 CLNKQ7Z7G1 428 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 DDX17Q92841 729 aaKnown RBP20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 BTBD10Q9BSF8 475 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 STK33Q9BYT3 514 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 UBA5Q9GZZ9 404 aa20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 STX18Q9P2W9 335 aaKnown RBP20.79■□□□□ 0.92
AP003356.1-202ENST00000517910 CLIC2O15247 247 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 GSC2O15499 205 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 TOM1O60784 492 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 DLATP10515 647 aaKnown RBP20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 ITIH2P19823 946 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 TNNI2P48788 182 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 SIX1Q15475 284 aaPredicted RBP20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 C11orf63Q6NUN7 778 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 MCUR1Q96AQ8 359 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 NR1H4Q96RI1 486 aaPredicted RBP20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 TUBGCP5Q96RT8 1024 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 CCDC77Q9BR77 488 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 DNAJC18Q9H819 358 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 NPHS2Q9NP85 383 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 POTEB3A0JP26 581 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 POTECB2RU33 542 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 CALUO43852 315 aaPredicted RBP20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 NKX1-1Q15270 411 aaPredicted RBP20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 LIN52Q52LA3 116 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 SUSD4Q5VX71 490 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 POTEBQ6S5H4 581 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 SCYL3Q8IZE3 742 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 WDR60Q8WVS4 1066 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 SYT11Q9BT88 431 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 ASCC2Q9H1I8 757 aaPredicted RBP20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 GRID1Q9ULK0 1009 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 NUMBLQ9Y6R0 609 aa20.78■□□□□ 0.92
AP003356.1-202ENST00000517910 GYG2O15488 501 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 HNRNPCL1O60812 293 aaKnown RBP20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 SPATA31D3P0C874 917 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 HOXD13P35453 343 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 LSAMPQ13449 338 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 UBE4AQ14139 1066 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 SPATA31D4Q6ZUB0 917 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 ZNF444Q8N0Y2 327 aaPredicted RBP20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 VPS52Q8N1B4 723 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 DYDC2Q96IM9 177 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 C9orf72Q96LT7 481 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 CENPKQ9BS16 269 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 PCDHA12Q9UN75 941 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 WASF2Q9Y6W5 498 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 NR3C1P04150 777 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 VPS41P49754 854 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 ARHGAP44Q17R89 818 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 CTC1Q2NKJ3 1217 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 CAVIN4Q5BKX8 364 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 CPNE8Q86YQ8 564 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 SLC44A5Q8NCS7 719 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 HAS1Q92839 578 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 COA7Q96BR5 231 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 SNF8Q96H20 258 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 ZNF212Q9UDV6 495 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 ZBTB1Q9Y2K1 713 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 COMMD3-BMI1R4GMX3 469 aa20.77■□□□□ 0.92
AP003356.1-202ENST00000517910 CFAP69A5D8W1 941 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 CCNFP41002 786 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 USP46P62068 366 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 PDK4Q16654 411 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 ARSHQ5FYA8 562 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 SPDYAQ5MJ70 313 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 OTOAQ7RTW8 1153 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 DCTN4Q9UJW0 460 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 COL18A1P39060 1754 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 C2CD2LO14523 706 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 FAM200BP0CF97 657 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 RFX8Q6ZV50 586 aa20.76■□□□□ 0.91
AP003356.1-202ENST00000517910 ZNF34Q8IZ26 560 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms