RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 TBC1D13Q9NVG8 400 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 GDE1Q9NZC3 331 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 FNIP2Q9P278 1114 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 DBNLQ9UJU6 430 aaKnown RBP2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 FBXW11Q9UKB1 542 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 KCNH3Q9ULD8 1083 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 LRFN2Q9ULH4 789 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 CIZ1Q9ULV3 898 aaPredicted RBP2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 PCDHA2Q9Y5H9 948 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 TRPV2Q9Y5S1 764 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 ZANQ9Y493 2812 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 BIRC6Q9NR09 4857 aa2.76□□□□□ -1.97
RNU1-48P-201ENST00000516400 WDR19Q8NEZ3 1342 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 FANCIQ9NVI1 1328 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 CMYA5Q8N3K9 4069 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 MAGEB6P1A0A0J9YX57 407 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SMIM35A0A1B0GVV1 85 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SPATA31C2B4DYI2 1134 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 F8W810 466 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SPECC1L-ADORA2AF8WAN1 911 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 ARHGAP33O14559 1287 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 RAD21O60216 631 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SORBS3O60504 671 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 OFD1O75665 1012 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 MICAL2O94851 1124 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 CLDN1O95832 211 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 GLUD1P00367 558 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SERPINF2P08697 491 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SNHG28P0DPA3 235 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 HLA-EP13747 358 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 INSRRP14616 1297 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 PDE6AP16499 860 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 PSMC3P17980 439 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 RPL17P18621 184 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 HOXA9P31269 272 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SLC16A2P36021 539 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 HSD17B4P51659 736 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 EMP3P54852 163 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 EXOSC9Q06265 439 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 NFX1Q12986 1120 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 LRRC32Q14392 662 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 GRIK4Q16099 956 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 MAP7D1Q3KQU3 841 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SPDYCQ5MJ68 293 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 ARHGAP40Q5TG30 622 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 IER5Q5VY09 327 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 KIAA1614Q5VZ46 1190 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SPNS3Q6ZMD2 512 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SYT13Q7L8C5 426 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 PALB2Q86YC2 1186 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 NAXDQ8IW45 347 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 MFSD6LQ8IWD5 586 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 WWC1Q8IX03 1113 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SRRM1Q8IYB3 904 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 CACTIN-AS1Q8N1I8 211 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 GALNT15Q8N3T1 639 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 NME8Q8N427 588 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 MRPL50Q8N5N7 158 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 LINC01465Q8N7H1 131 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 NEDD1Q8NHV4 660 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 HELQQ8TDG4 1101 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 NSUN6Q8TEA1 469 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 MCRS1Q96EZ8 462 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 TMEM176AQ96HP8 235 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 CLSTN3Q9BQT9 956 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 PDCD2LQ9BRP1 358 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 TRMT61BQ9BVS5 477 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 CSRNP2Q9H175 543 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 EPN3Q9H201 632 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 ARMT1Q9H993 441 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 TLR7Q9NYK1 1049 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SEPT9Q9UHD8 586 aaPredicted RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 TUBE1Q9UJT0 475 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 SLC6A14Q9UN76 642 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 APOBEC2Q9Y235 224 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 INVSQ9Y283 1065 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 MRVI1Q9Y6F6 885 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 FLNAP21333 2647 aaKnown RBP2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 CROCCQ5TZA2 2017 aa2.75□□□□□ -1.97
RNU1-48P-201ENST00000516400 ZNF532Q9HCE3 1301 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 RP1L1Q8IWN7 2480 aaPredicted RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 PLXNA2O75051 1894 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 WDR27A2RRH5 827 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 GSG1L2A8MUP6 293 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TRDMT1O14717 391 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 RIOK3O14730 519 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 NRP1O14786 923 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 RRP8O43159 456 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ADAM12O43184 909 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 OPHN1O60890 802 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ZNF623O75123 536 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 RPS6KA5O75582 802 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 IDH1O75874 414 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TTLL1O95922 423 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ZNF883P0CG24 379 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 CEBPBP17676 345 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ITPKAP23677 461 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 GDI1P31150 447 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ADRA1BP35368 520 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms