RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.42
SNX25-206ENST00000513433 SIPA1L3O60292 1781 aaPredicted RBP6.21□□□□□ -1.42
SNX25-206ENST00000513433 ITGB4P16144 1822 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 CCER2I3L3R5 266 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 APPP05067 770 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 HHEXQ03014 270 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 RIN1Q13671 783 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 TUBA3CQ13748 450 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 SOGA3Q5TF21 947 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 SULT6B1Q6IMI4 303 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 TUBA3EQ6PEY2 450 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 KLHDC10Q6PID8 442 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 PLEKHG4BQ96PX9 1271 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 BOCQ9BWV1 1114 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 HAPLN2Q9GZV7 340 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 SLC6A15Q9H2J7 730 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 PAPPAQ13219 1627 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 PCDH11XQ9BZA7 1347 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 PCDH11YQ9BZA8 1340 aa6.2□□□□□ -1.42
SNX25-206ENST00000513433 HIP1RO75146 1068 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 IRF9Q00978 393 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 FGD2Q7Z6J4 655 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 D2HGDHQ8N465 521 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 C2orf69Q8N8R5 385 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 IGSF22Q8N9C0 903 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 NKD2Q969F2 451 aaPredicted RBP6.19□□□□□ -1.42
SNX25-206ENST00000513433 GFM2Q969S9 779 aaKnown RBP6.19□□□□□ -1.42
SNX25-206ENST00000513433 E2F7Q96AV8 911 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 CEP89Q96ST8 783 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 IKZF4Q9H2S9 585 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 NCOA5Q9HCD5 579 aaKnown RBP6.19□□□□□ -1.42
SNX25-206ENST00000513433 BTAF1O14981 1849 aa6.19□□□□□ -1.42
SNX25-206ENST00000513433 CICQ96RK0 1608 aaPredicted RBP6.18□□□□□ -1.42
SNX25-206ENST00000513433 DVL2O14641 736 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 H2AFYO75367 372 aaKnown RBP6.18□□□□□ -1.42
SNX25-206ENST00000513433 PRLP01236 227 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 HMOX1P09601 288 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 U2AF1L5P0DN76 240 aaPredicted RBP6.18□□□□□ -1.42
SNX25-206ENST00000513433 PRKAR2BP31323 418 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 INHBCP55103 352 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 U2AF1Q01081 240 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNX25-206ENST00000513433 TMEM132BQ14DG7 1078 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 WDR43Q15061 677 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNX25-206ENST00000513433 DDB1Q16531 1140 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 AMOTQ4VCS5 1084 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 CCDC184Q52MB2 194 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 C2orf27AQ580R0 203 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 PCSK4Q6UW60 755 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 SGMS1Q86VZ5 419 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 LDLRAD3Q86YD5 345 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 SLC7A6OSQ96CW6 309 aaPredicted RBP6.18□□□□□ -1.42
SNX25-206ENST00000513433 SH3BP1Q9Y3L3 701 aa6.18□□□□□ -1.42
SNX25-206ENST00000513433 KDM6AO15550 1401 aaPredicted RBP6.17□□□□□ -1.42
SNX25-206ENST00000513433 UBR2Q8IWV8 1755 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 C2orf78A6NCI8 922 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 PLD2O14939 933 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 GTF2F1P35269 517 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNX25-206ENST00000513433 INHBEP58166 350 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 ADAM15Q13444 863 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 GPR162Q16538 588 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 SMN1Q16637 294 aaKnown RBP6.17□□□□□ -1.42
SNX25-206ENST00000513433 GAGE13Q4V321 117 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 HTR3DQ70Z44 454 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 ULK2Q8IYT8 1036 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 ANKRD35Q8N283 1001 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 DNAJC5GQ8N7S2 189 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 ZCRB1Q8TBF4 217 aaKnown RBP6.17□□□□□ -1.42
SNX25-206ENST00000513433 PNISRQ8TF01 805 aaKnown RBP6.17□□□□□ -1.42
SNX25-206ENST00000513433 ZNF483Q8TF39 744 aaPredicted RBP6.17□□□□□ -1.42
SNX25-206ENST00000513433 MAML3Q96JK9 1138 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 PLEKHF1Q96S99 279 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 GPHA2Q96T91 129 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 SYT17Q9BSW7 474 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 PNNQ9H307 717 aaKnown RBP6.17□□□□□ -1.42
SNX25-206ENST00000513433 SAE1Q9UBE0 346 aaPredicted RBP6.17□□□□□ -1.42
SNX25-206ENST00000513433 MAP3K5Q99683 1374 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 ZNF831Q5JPB2 1677 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 RREB1Q92766 1687 aa6.17□□□□□ -1.42
SNX25-206ENST00000513433 LY75O60449 1722 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 CAPN14A8MX76 684 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 B4E1Z4 1266 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 EXOC5O00471 708 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 PHKG2P15735 406 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 MAKP20794 623 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 ROM1Q03395 351 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 RRP1BQ14684 758 aaKnown RBP6.16□□□□□ -1.42
SNX25-206ENST00000513433 PLEKHO1Q53GL0 409 aaPredicted RBP6.16□□□□□ -1.42
SNX25-206ENST00000513433 Q6ZPA2 131 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 LARP4BQ92615 738 aaKnown RBP6.16□□□□□ -1.42
SNX25-206ENST00000513433 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 CAMKK2Q96RR4 588 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 ACSS2Q9NR19 701 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 PARPBPQ9NWS1 579 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 C11orf21Q9P2W6 132 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 PTCH2Q9Y6C5 1203 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 MAPK8IP3Q9UPT6 1336 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 CEMIPQ8WUJ3 1361 aa6.16□□□□□ -1.42
SNX25-206ENST00000513433 HSP90AB1P08238 724 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms