RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RGMAQ96B86 450 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 CEP95Q96GE4 821 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 CLPTM1LQ96KA5 538 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 SAMD11Q96NU1 681 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 B3GNT5Q9BYG0 378 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 JADE2Q9NQC1 790 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 TDP1Q9NUW8 608 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 AJAP1Q9UKB5 411 aaPredicted RBP4.44□□□□□ -1.7
LSM6-205ENST00000507449 NR2E1Q9Y466 385 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 ZMYM3Q14202 1370 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 APAF1O14727 1248 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 ZBED1O96006 694 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 MYL1P05976 194 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 GYPEP15421 78 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 RHCEP18577 417 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 KCNC1P48547 511 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 AGFG1P52594 562 aaKnown RBP4.43□□□□□ -1.7
LSM6-205ENST00000507449 HK3P52790 923 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 GJA9P57773 515 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 RHDQ02161 417 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 TLE1Q04724 770 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 DUSP2Q05923 314 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 NOGQ13253 232 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 MFSD14BQ5SR56 506 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 FAM180AQ6UWF9 173 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 NPNTQ6UXI9 565 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 TTC7BQ86TV6 843 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 CMTM4Q8IZR5 234 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 FAM43AQ8N2R8 423 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 DCBLD1Q8N8Z6 715 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 FAM156AQ8NDB6 213 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 MDM1Q8TC05 714 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 STON2Q8WXE9 905 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 TMX3Q96JJ7 454 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 PTPN18Q99952 460 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 VRK1Q99986 396 aaPredicted RBP4.43□□□□□ -1.7
LSM6-205ENST00000507449 DPYSL5Q9BPU6 564 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 MEGF9Q9H1U4 602 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 KCNH6Q9H252 994 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 LANCL2Q9NS86 450 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 NR2E3Q9Y5X4 410 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 DUSP10Q9Y6W6 482 aa4.43□□□□□ -1.7
LSM6-205ENST00000507449 MYBBP1AQ9BQG0 1328 aaKnown RBP4.43□□□□□ -1.7
LSM6-205ENST00000507449 NT5C1B-RDH14C9J2C7 533 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 FAM227AF5H4B4 570 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 SLC26A4O43511 780 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 STC2O76061 302 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 GASTP01350 101 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 FTLP02792 175 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 HRGP04196 525 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 ALOX15P16050 662 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 HOXA5P20719 270 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 ZNF280AP59817 542 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 NKX6-1P78426 367 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 PURAQ00577 322 aaKnown RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 KIAA2012Q0VF49 1180 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 RIN1Q13671 783 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 KHDC1Q4VXA5 237 aaKnown RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 GJC2Q5T442 439 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 KRT40Q6A162 431 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 PPP4R3AQ6IN85 833 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 ZNF572Q7Z3I7 529 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 KLHDC4Q8TBB5 520 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 NEIL1Q96FI4 390 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 NT5C1BQ96P26 610 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 UHRF1Q96T88 793 aaPredicted RBP4.42□□□□□ -1.7
LSM6-205ENST00000507449 MANSC1Q9H8J5 431 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 IL23AQ9NPF7 189 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 MAN1C1Q9NR34 630 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 L1RE1Q9UN81 338 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 STXBP5LQ9Y2K9 1186 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 PCDHA3Q9Y5H8 950 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 ACTL7AQ9Y615 435 aa4.42□□□□□ -1.7
LSM6-205ENST00000507449 UBE2QL1A1L167 161 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 PMS2P1A4D2B8 440 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SLC16A6O15403 523 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SUV39H1O43463 412 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 FOXD2O60548 495 aaPredicted RBP4.41□□□□□ -1.7
LSM6-205ENST00000507449 GPR32O75388 356 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 DDCP20711 480 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 MALP21145 153 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 PTPN7P35236 360 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 ALDH1A3P47895 512 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 PER3P56645 1201 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SNAPC2Q13487 334 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 UBE4AQ14139 1066 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 CSRP2Q16527 193 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 FAM214AQ32MH5 1076 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 ANO6Q4KMQ2 910 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 COBLL1Q53SF7 1204 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SYCP2LQ5T4T6 812 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 HEATR3Q7Z4Q2 680 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SRGAP1Q7Z6B7 1085 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 FAM124AQ86V42 546 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SHCBP1Q8NEM2 672 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 PJA1Q8NG27 643 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 CASKIN2Q8WXE0 1202 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 CYFIP2Q96F07 1278 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms