RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 HYIQ5T013 277 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 C1QTNF12Q5T7M4 302 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 GPR158Q5T848 1215 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 TMC5Q6UXY8 1006 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 SRLQ86TD4 932 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 CPA6Q8N4T0 437 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 NKAPQ8N5F7 415 aaKnown RBP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 DEFB123Q8N688 67 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 CXorf38Q8TB03 319 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 KCNN1Q92952 543 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 USP7Q93009 1102 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 DACT3Q96B18 629 aaPredicted RBP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 LRGUKQ96M69 825 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 NAA15Q9BXJ9 866 aaKnown RBP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 IFT22Q9H7X7 185 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 SLC39A2Q9NP94 309 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 NLRC4Q9NPP4 1024 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 POLG2Q9UHN1 485 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 HDAC9Q9UKV0 1011 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 ASAP1Q9ULH1 1129 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 SMG5Q9UPR3 1016 aaKnown RBP4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 DMTF1Q9Y222 760 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 ANKRD6Q9Y2G4 727 aa4.41□□□□□ -1.7
EXOSC3-208ENST00000496910 ZNF292O60281 2723 aa4.4□□□□□ -1.7
EXOSC3-208ENST00000496910 TPRP12270 2363 aaKnown RBP4.4□□□□□ -1.7
EXOSC3-208ENST00000496910 MIA2Q96PC5 1412 aa4.4□□□□□ -1.7
EXOSC3-208ENST00000496910 C5orf42Q9H799 3197 aa4.4□□□□□ -1.7
EXOSC3-208ENST00000496910 NCOR1O75376 2440 aa4.4□□□□□ -1.7
EXOSC3-208ENST00000496910 LCHNA4D1U4 455 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 PRAMEF25A6NGN4 478 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 GOLGA6L22H0YM25 854 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 NFIBO00712 420 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 ANP32CO43423 234 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 APPP05067 770 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 TMEM253P0C7T8 217 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 TNFAIP3P21580 790 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 CYP2C19P33261 490 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 ALDH5A1P51649 535 aaPredicted RBP4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 TERF1P54274 439 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 LINC00310P59036 64 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 ERVK-21P61565 698 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 NKX3-2P78367 333 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 PFKPQ01813 784 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 BIRC3Q13489 604 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 LRRC32Q14392 662 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 TMEM132BQ14DG7 1078 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 EPHA7Q15375 998 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 STILQ15468 1287 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 SKIDA1Q1XH10 827 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 TMEM240Q5SV17 173 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 JAKMIP3Q5VZ66 844 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 TMEM132EQ6IEE7 984 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 PDXDC1Q6P996 788 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 C16orf54Q6UWD8 224 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 SAPCD2Q86UD0 394 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 STK32CQ86UX6 486 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 ZC3H18Q86VM9 953 aaKnown RBP4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 C1QL4Q86Z23 238 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 KYQ8NBH2 561 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 TP53I13Q8NBR0 393 aaPredicted RBP4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 CLRN3Q8NCR9 226 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 POF1BQ8WVV4 589 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 PPP1R16BQ96T49 567 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 SLC13A1Q9BZW2 595 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 SEMA4AQ9H3S1 761 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 VTA1Q9NP79 307 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 ACSS2Q9NR19 701 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 MAN1C1Q9NR34 630 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 DLL4Q9NR61 685 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 KCND1Q9NSA2 647 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 SAP30BPQ9UHR5 308 aaKnown RBP4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 RCAN3Q9UKA8 241 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 APOBEC2Q9Y235 224 aaKnown RBP4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 ZKSCAN5Q9Y2L8 839 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 ASB1Q9Y576 335 aa4.4□□□□□ -1.71
EXOSC3-208ENST00000496910 CHD2O14647 1828 aaKnown RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 WRNQ14191 1432 aaPredicted RBP eCLIP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 NWD2Q9ULI1 1742 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 A6NNZ2 444 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 F5H423 210 aaPredicted RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 H0YGN5 161 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 K7ESF4 209 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 FFAR3O14843 346 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 ERC2O15083 957 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 HIP1RO75146 1068 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 SNUPNO95149 360 aaKnown RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 PRLP01236 227 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 CYP17A1P05093 508 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 C8AP07357 584 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 SETSIPP0DME0 302 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 VDRP11473 427 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 SLC5A1P13866 664 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 PTGS1P23219 599 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 ITGB8P26012 769 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 KPNA1P52294 538 aaPredicted RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 USP14P54578 494 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 IL2P60568 153 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 GTF2H3Q13889 308 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 ODF1Q14990 250 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms