RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
THBS3-208ENST00000496332 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
THBS3-208ENST00000496332 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
THBS3-208ENST00000496332 KCND2Q9NZV8 630 aa13.01□□□□□ -0.33
THBS3-208ENST00000496332 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
THBS3-208ENST00000496332 KCNG1Q9UIX4 513 aa13.01□□□□□ -0.33
THBS3-208ENST00000496332 SSX2IPQ9Y2D8 614 aa13.01□□□□□ -0.33
THBS3-208ENST00000496332 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
THBS3-208ENST00000496332 CASTOR2A6NHX0 329 aa13□□□□□ -0.33
THBS3-208ENST00000496332 LOC730098B7Z3J9 87 aa13□□□□□ -0.33
THBS3-208ENST00000496332 DCXO43602 365 aa13□□□□□ -0.33
THBS3-208ENST00000496332 TADA2AO75478 443 aa13□□□□□ -0.33
THBS3-208ENST00000496332 THP07101 528 aa13□□□□□ -0.33
THBS3-208ENST00000496332 GLUD2P49448 558 aa13□□□□□ -0.33
THBS3-208ENST00000496332 SMTNP53814 917 aa13□□□□□ -0.33
THBS3-208ENST00000496332 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
THBS3-208ENST00000496332 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
THBS3-208ENST00000496332 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
THBS3-208ENST00000496332 KARSQ15046 597 aaKnown RBP13□□□□□ -0.33
THBS3-208ENST00000496332 PTPAQ15257 358 aa13□□□□□ -0.33
THBS3-208ENST00000496332 TMEM31Q5JXX7 168 aa13□□□□□ -0.33
THBS3-208ENST00000496332 KIAA0319Q5VV43 1072 aa13□□□□□ -0.33
THBS3-208ENST00000496332 KIAA1841Q6NSI8 718 aa13□□□□□ -0.33
THBS3-208ENST00000496332 CES5AQ6NT32 575 aa13□□□□□ -0.33
THBS3-208ENST00000496332 KANK3Q6NY19 840 aa13□□□□□ -0.33
THBS3-208ENST00000496332 ZBTB33Q86T24 672 aa13□□□□□ -0.33
THBS3-208ENST00000496332 RNF135Q8IUD6 432 aa13□□□□□ -0.33
THBS3-208ENST00000496332 C12orf76Q8N812 135 aaPredicted RBP13□□□□□ -0.33
THBS3-208ENST00000496332 RASSF8Q8NHQ8 419 aa13□□□□□ -0.33
THBS3-208ENST00000496332 LRRC15Q8TF66 581 aa13□□□□□ -0.33
THBS3-208ENST00000496332 RPGRIP1Q96KN7 1286 aa13□□□□□ -0.33
THBS3-208ENST00000496332 PAAF1Q9BRP4 392 aa13□□□□□ -0.33
THBS3-208ENST00000496332 TCHPQ9BT92 498 aa13□□□□□ -0.33
THBS3-208ENST00000496332 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
THBS3-208ENST00000496332 GPR62Q9BZJ7 368 aa13□□□□□ -0.33
THBS3-208ENST00000496332 CDT1Q9H211 546 aa13□□□□□ -0.33
THBS3-208ENST00000496332 ADAM7Q9H2U9 754 aa13□□□□□ -0.33
THBS3-208ENST00000496332 PTPRHQ9HD43 1115 aa13□□□□□ -0.33
THBS3-208ENST00000496332 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
THBS3-208ENST00000496332 DZANK1Q9NVP4 752 aa13□□□□□ -0.33
THBS3-208ENST00000496332 CACNG4Q9UBN1 327 aa13□□□□□ -0.33
THBS3-208ENST00000496332 CDH22Q9UJ99 828 aa13□□□□□ -0.33
THBS3-208ENST00000496332 ADAM28Q9UKQ2 775 aa13□□□□□ -0.33
THBS3-208ENST00000496332 MTMR6Q9Y217 621 aa13□□□□□ -0.33
THBS3-208ENST00000496332 FAM86C2PA6NEL3 165 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
THBS3-208ENST00000496332 PLCG1P19174 1290 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 MARCKSP29966 332 aaPredicted RBP12.99□□□□□ -0.33
THBS3-208ENST00000496332 GRM5P41594 1212 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 CLCN4P51793 760 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 OSTNP61366 133 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 DSG1Q02413 1049 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 CEBPZQ03701 1054 aaKnown RBP12.99□□□□□ -0.33
THBS3-208ENST00000496332 ITIH3Q06033 890 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 STRN3Q13033 797 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 NAB2Q15742 525 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 USP41Q3LFD5 358 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 ZNF568Q3ZCX4 644 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 RARS2Q5T160 578 aaKnown RBP12.99□□□□□ -0.33
THBS3-208ENST00000496332 FUT10Q6P4F1 479 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 GPBP1Q86WP2 473 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 CEP120Q8N960 986 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 TMEM161BQ8NDZ6 487 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 RAD54LQ92698 747 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 SNX21Q969T3 373 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 B3GALT6Q96L58 329 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 FBXL18Q96ME1 805 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 LRFN3Q9BTN0 628 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 C11orf16Q9NQ32 467 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 CHST7Q9NS84 486 aa12.99□□□□□ -0.33
THBS3-208ENST00000496332 FBXO2Q9UK22 296 aaPredicted RBP12.99□□□□□ -0.33
THBS3-208ENST00000496332 TEX28O15482 410 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 STX6O43752 255 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 GPR37L1O60883 481 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 KIF4AO95239 1232 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 ADH1AP07327 375 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 WEE2P0C1S8 567 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 MCF2P10911 925 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 COL9A1P20849 921 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 PROZP22891 400 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 YARSP54577 528 aaKnown RBP12.98□□□□□ -0.33
THBS3-208ENST00000496332 MCM6Q14566 821 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 GLRA4Q5JXX5 417 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 USP49Q70CQ1 688 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 HASPINQ8TF76 798 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 EPSTI1Q96J88 318 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 ZBTB45Q96K62 511 aaPredicted RBP12.98□□□□□ -0.33
THBS3-208ENST00000496332 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 REEP2Q9BRK0 252 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
THBS3-208ENST00000496332 CCSER1Q9C0I3 900 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
THBS3-208ENST00000496332 RXFP1Q9HBX9 757 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 LARSQ9P2J5 1176 aaKnown RBP12.98□□□□□ -0.33
THBS3-208ENST00000496332 MUTYHQ9UIF7 546 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 ODF2LQ9ULJ1 636 aa12.98□□□□□ -0.33
THBS3-208ENST00000496332 SRPRBQ9Y5M8 271 aaKnown RBP12.98□□□□□ -0.33
THBS3-208ENST00000496332 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms