RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ZNF292O60281 2723 aa19.48■□□□□ 0.71
TMEM53-209ENST00000495630 NPTXRO95502 500 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 XRCC6P12956 609 aaKnown RBP eCLIP19.47■□□□□ 0.71
TMEM53-209ENST00000495630 GLRA2P23416 452 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 GPC5P78333 572 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 HSP90AA2PQ14568 343 aaPredicted RBP19.47■□□□□ 0.71
TMEM53-209ENST00000495630 GRASPQ7Z6J2 395 aaPredicted RBP19.47■□□□□ 0.71
TMEM53-209ENST00000495630 KIAA2013Q8IYS2 634 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 OXER1Q8TDS5 423 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 RUBCNQ92622 972 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 RABGGTAQ92696 567 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 TTPALQ9BTX7 342 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 RPP25Q9BUL9 199 aaKnown RBP19.47■□□□□ 0.71
TMEM53-209ENST00000495630 PDRG1Q9NUG6 133 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 KLK14Q9P0G3 267 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 FBXW11Q9UKB1 542 aa19.47■□□□□ 0.71
TMEM53-209ENST00000495630 SF3B1O75533 1304 aaKnown RBP eCLIP19.47■□□□□ 0.71
TMEM53-209ENST00000495630 B4GALT5O43286 388 aa19.46■□□□□ 0.71
TMEM53-209ENST00000495630 TUSC3Q13454 348 aa19.46■□□□□ 0.71
TMEM53-209ENST00000495630 PRSS55Q6UWB4 352 aaPredicted RBP19.46■□□□□ 0.71
TMEM53-209ENST00000495630 DGLUCYQ7Z3D6 616 aa19.46■□□□□ 0.71
TMEM53-209ENST00000495630 PIK3R5Q8WYR1 880 aa19.46■□□□□ 0.71
TMEM53-209ENST00000495630 CLSTN3Q9BQT9 956 aa19.46■□□□□ 0.71
TMEM53-209ENST00000495630 STK36Q9NRP7 1315 aa19.46■□□□□ 0.71
TMEM53-209ENST00000495630 DOCK8Q8NF50 2099 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 CACNA1AO00555 2505 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 GLULP15104 373 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 HOXA9P31269 272 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 RARRES1P49788 294 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 SCRN1Q12765 414 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 PUM1Q14671 1186 aaKnown RBP eCLIP19.45■□□□□ 0.7
TMEM53-209ENST00000495630 EARS2Q5JPH6 523 aaKnown RBP19.45■□□□□ 0.7
TMEM53-209ENST00000495630 RTP2Q5QGT7 225 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 LIN9Q5TKA1 542 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 PDXDC1Q6P996 788 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 PARM1Q6UWI2 310 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 MTSS1LQ765P7 747 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 CDR2LQ86X02 465 aaPredicted RBP19.45■□□□□ 0.7
TMEM53-209ENST00000495630 LNX1Q8TBB1 728 aaPredicted RBP19.45■□□□□ 0.7
TMEM53-209ENST00000495630 FGF14Q92915 247 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 PRIMPOLQ96LW4 560 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 OSBPL6Q9BZF3 934 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 FOXQ1Q9C009 403 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 GJB4Q9NTQ9 266 aa19.45■□□□□ 0.7
TMEM53-209ENST00000495630 KANSL1LA0AUZ9 987 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 XYLBO75191 536 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 PRKCQQ04759 706 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 ELAVL2Q12926 359 aaKnown RBP19.44■□□□□ 0.7
TMEM53-209ENST00000495630 UVSSAQ2YD98 709 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 ZNF528Q3MIS6 628 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 SLC44A4Q53GD3 710 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 PPM1LQ5SGD2 360 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 FAM171A1Q5VUB5 890 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 CEP57Q86XR8 500 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 MAML2Q8IZL2 1156 aaPredicted RBP19.44■□□□□ 0.7
TMEM53-209ENST00000495630 ST13P5Q8NFI4 369 aaPredicted RBP19.44■□□□□ 0.7
TMEM53-209ENST00000495630 WASF1Q92558 559 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 FGF13Q92913 245 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 CCDC43Q96MW1 224 aaKnown RBP19.44■□□□□ 0.7
TMEM53-209ENST00000495630 HINFPQ9BQA5 517 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 PAAF1Q9BRP4 392 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 DDX23Q9BUQ8 820 aaKnown RBP19.44■□□□□ 0.7
TMEM53-209ENST00000495630 BCO2Q9BYV7 579 aa19.44■□□□□ 0.7
TMEM53-209ENST00000495630 PRMT7Q9NVM4 692 aaPredicted RBP19.44■□□□□ 0.7
TMEM53-209ENST00000495630 MTCL1Q9Y4B5 1905 aaKnown RBP19.43■□□□□ 0.7
TMEM53-209ENST00000495630 THP07101 528 aa19.43■□□□□ 0.7
TMEM53-209ENST00000495630 NTHL1P78549 312 aa19.43■□□□□ 0.7
TMEM53-209ENST00000495630 SNW1Q13573 536 aaKnown RBP19.43■□□□□ 0.7
TMEM53-209ENST00000495630 FAM187BQ17R55 369 aa19.43■□□□□ 0.7
TMEM53-209ENST00000495630 RSPO2Q6UXX9 243 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-209ENST00000495630 RTL10Q7L3V2 364 aa19.43■□□□□ 0.7
TMEM53-209ENST00000495630 SUMF1Q8NBK3 374 aa19.43■□□□□ 0.7
TMEM53-209ENST00000495630 POLR3FQ9H1D9 316 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-209ENST00000495630 FZD8Q9H461 694 aa19.43■□□□□ 0.7
TMEM53-209ENST00000495630 TTC12Q9H892 705 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-209ENST00000495630 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-209ENST00000495630 FBXO4Q9UKT5 387 aa19.43■□□□□ 0.7
TMEM53-209ENST00000495630 POTEMA6NI47 508 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 PFKFB2O60825 505 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 KINO60870 393 aaKnown RBP19.42■□□□□ 0.7
TMEM53-209ENST00000495630 C8AP07357 584 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 POU2F2P09086 479 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 PFKPQ01813 784 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 MLF2Q15773 248 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-209ENST00000495630 PSMD5Q16401 504 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 CALCRLQ16602 461 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 PIGOQ8TEQ8 1089 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 DLL3Q9NYJ7 618 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 ORC3Q9UBD5 711 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-209ENST00000495630 CACNG4Q9UBN1 327 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
TMEM53-209ENST00000495630 CASTOR2A6NHX0 329 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 LRRIQ4A6NIV6 560 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 FAM170BA6NMN3 283 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 PTGESO14684 152 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 N4BP3O15049 544 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 CCL16O15467 120 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 LAMTOR5O43504 91 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 LRRN2O75325 713 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms