RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 MED24O75448 989 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 CXCL14O95715 111 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 EDN1P05305 212 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 PNMA6AP0CW24 399 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 EPCAMP16422 314 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 SFPQP23246 707 aaKnown RBP eCLIP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 GLRA2P23416 452 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 TXKP42681 527 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 SSR1P43307 286 aaKnown RBP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 DNM2P50570 870 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 PDAP1Q13442 181 aaKnown RBP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 CAPSQ13938 189 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 CBX2Q14781 532 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 ANKRD1Q15327 319 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 CALCRLQ16602 461 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 ECM1Q16610 540 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 HERC4Q5GLZ8 1057 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 TMEM184AQ6ZMB5 413 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 MMS22LQ6ZRQ5 1243 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 TAS1R1Q7RTX1 841 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 TMC7Q7Z402 723 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 MRPL10Q7Z7H8 261 aaKnown RBP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 DRC7Q8IY82 874 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 ABI1Q8IZP0 508 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 VPS52Q8N1B4 723 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 MRPL43Q8N983 215 aaKnown RBP8.99□□□□□ -0.97
HDAC6-234ENST00000493923 RNF149Q8NC42 400 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 ANKRD20A12PQ8NF67 263 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 IGSF21Q96ID5 467 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 RPGRIP1Q96KN7 1286 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 ZBP1Q9H171 429 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 SMOC2Q9H3U7 446 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 CXorf56Q9H5V9 222 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 ZSWIM4Q9H7M6 989 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 DACT1Q9NYF0 836 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 CACNG4Q9UBN1 327 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 PLXNA3P51805 1871 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 TDRD15B5MCY1 1934 aaKnown RBP8.98□□□□□ -0.97
HDAC6-234ENST00000493923 WDR87Q6ZQQ6 2873 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 PRR33A8MZF0 331 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 MARCH6O60337 910 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 TSPAN1O60635 241 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 LYPLA2O95372 231 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 POMCP01189 267 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 XBP1P17861 261 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 MCM7P33993 719 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 ACTN2P35609 894 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 ARL2P36404 184 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 RFC5P40937 340 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 GSDMDP57764 484 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 PTENP60484 403 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 MBTD1Q05BQ5 628 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 ZNF174Q15697 407 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 NYAP1Q6ZVC0 841 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 MAEAQ7L5Y9 396 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 SRGAP1Q7Z6B7 1085 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 EGFL6Q8IUX8 553 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 EFCAB13Q8IY85 973 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 SLC22A17Q8WUG5 538 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 PSPC1Q8WXF1 523 aaKnown RBP8.98□□□□□ -0.97
HDAC6-234ENST00000493923 SLC7A3Q8WY07 619 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 BSNDQ8WZ55 320 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 WASF1Q92558 559 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 RABGGTAQ92696 567 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 PPP2R3CQ969Q6 453 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 PHF7Q9BWX1 381 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-234ENST00000493923 POMKQ9H5K3 350 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 L2HGDHQ9H9P8 463 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 NGRNQ9NPE2 291 aaKnown RBP8.98□□□□□ -0.97
HDAC6-234ENST00000493923 MARCH5Q9NX47 278 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 FAM50BQ9Y247 325 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 HCFC2Q9Y5Z7 792 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 FHOD1Q9Y613 1164 aa8.98□□□□□ -0.97
HDAC6-234ENST00000493923 DOCK8Q8NF50 2099 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 USO1O60763 962 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 LILRB3O75022 631 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 PDGFBP01127 241 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 SSBP05455 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 MYBP10242 640 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 ALADP13716 330 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 ARF4P18085 180 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 LIG1P18858 919 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 IGFBP6P24592 240 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 CA8P35219 290 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 PPM1AP35813 382 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 RARRES1P49788 294 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 TUBB4BP68371 445 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 PKP1Q13835 747 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 SMC1AQ14683 1233 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 ELF2Q15723 593 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 RARS2Q5T160 578 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 PDE12Q6L8Q7 609 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 GLB1LQ6UWU2 654 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 FAM43BQ6ZT52 329 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 DDX53Q86TM3 631 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 SLFN12Q8IYM2 578 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 C4orf32Q8N8J7 132 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 FAM122AQ96E09 287 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 TMX3Q96JJ7 454 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms