RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
IRF1-210ENST00000493208 PLEKHA4Q9H4M7 779 aa14.93□□□□□ -0.02
IRF1-210ENST00000493208 CD320Q9NPF0 282 aa14.93□□□□□ -0.02
IRF1-210ENST00000493208 ODF2LQ9ULJ1 636 aa14.93□□□□□ -0.02
IRF1-210ENST00000493208 USTQ9Y2C2 406 aa14.93□□□□□ -0.02
IRF1-210ENST00000493208 C2CD2LO14523 706 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 RECQL4O94761 1208 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
IRF1-210ENST00000493208 MCF2P10911 925 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 PLS3P13797 630 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 MATR3P43243 847 aaKnown RBP eCLIP14.92□□□□□ -0.02
IRF1-210ENST00000493208 NPTX2P47972 431 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 DSG1Q02413 1049 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 RARS2Q5T160 578 aaKnown RBP14.92□□□□□ -0.02
IRF1-210ENST00000493208 RINT1Q6NUQ1 792 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 FUT10Q6P4F1 479 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 SYCE2Q6PIF2 218 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 OTOP3Q7RTS5 596 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 SUGP1Q8IWZ8 645 aaKnown RBP14.92□□□□□ -0.02
IRF1-210ENST00000493208 VN1R2Q8NFZ6 395 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 BSNDQ8WZ55 320 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 EDAQ92838 391 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 BICD1Q96G01 975 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
IRF1-210ENST00000493208 SNTG2Q9NY99 539 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 KLK14Q9P0G3 267 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 FNIP2Q9P278 1114 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 MUTYHQ9UIF7 546 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 MUC3AQ02505 3323 aa14.92□□□□□ -0.02
IRF1-210ENST00000493208 MYO7AQ13402 2215 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 TBCAO75347 108 aaKnown RBP14.91□□□□□ -0.02
IRF1-210ENST00000493208 CNPP09543 421 aaKnown RBP14.91□□□□□ -0.02
IRF1-210ENST00000493208 PLA2G4BP0C869 781 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 CLCN4P51793 760 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 MTMR3Q13615 1198 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 ECM1Q16610 540 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 C1orf186Q6ZWK4 172 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 CDR2LQ86X02 465 aaPredicted RBP14.91□□□□□ -0.02
IRF1-210ENST00000493208 UBALD2Q8IYN6 164 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
IRF1-210ENST00000493208 AUTS2Q8WXX7 1259 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 FAM122AQ96E09 287 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 ACAP3Q96P50 834 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 NTPCRQ9BSD7 190 aaKnown RBP14.91□□□□□ -0.02
IRF1-210ENST00000493208 TTPALQ9BTX7 342 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 APOL5Q9BWW9 433 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 RHOBTB2Q9BYZ6 727 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 ZSCAN16Q9H4T2 348 aaPredicted RBP14.91□□□□□ -0.02
IRF1-210ENST00000493208 RXFP1Q9HBX9 757 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 GDAQ9Y2T3 454 aa14.91□□□□□ -0.02
IRF1-210ENST00000493208 REV3LO60673 3130 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 PP2D1A8MPX8 630 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 XPOTO43592 962 aaKnown RBP14.9□□□□□ -0.02
IRF1-210ENST00000493208 TOM1L1O75674 476 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 FAM13AO94988 1023 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 GRM5P41594 1212 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 CUL4AQ13619 759 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 MPZL3Q6UWV2 235 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 ZPBP2Q6X784 338 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 SLC22A17Q8WUG5 538 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 BCL7CQ8WUZ0 217 aaPredicted RBP14.9□□□□□ -0.02
IRF1-210ENST00000493208 RIN2Q8WYP3 895 aaPredicted RBP14.9□□□□□ -0.02
IRF1-210ENST00000493208 ACO2Q99798 780 aaKnown RBP14.9□□□□□ -0.02
IRF1-210ENST00000493208 KIFC3Q9BVG8 833 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 PIDD1Q9HB75 910 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 MAN1C1Q9NR34 630 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 MARCH5Q9NX47 278 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 ZDHHC7Q9NXF8 308 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 ARHGAP28Q9P2N2 729 aa14.9□□□□□ -0.02
IRF1-210ENST00000493208 CLDN3O15551 220 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 EPCAMP16422 314 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 CDC25AP30304 524 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 AFF1P51825 1210 aaKnown RBP14.89□□□□□ -0.03
IRF1-210ENST00000493208 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
IRF1-210ENST00000493208 SIGLEC14Q08ET2 396 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 SF3A1Q15459 793 aaKnown RBP14.89□□□□□ -0.03
IRF1-210ENST00000493208 PTPN21Q16825 1174 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 KIAA0319Q5VV43 1072 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.89□□□□□ -0.03
IRF1-210ENST00000493208 GPR149Q86SP6 731 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 KRI1Q8N9T8 703 aaKnown RBP14.89□□□□□ -0.03
IRF1-210ENST00000493208 TSPAN18Q96SJ8 248 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 RUSC1Q9BVN2 902 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 PARVGQ9HBI0 331 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 CHST7Q9NS84 486 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 SORCS3Q9UPU3 1222 aa14.89□□□□□ -0.03
IRF1-210ENST00000493208 FAM86C2PA6NEL3 165 aa14.88□□□□□ -0.03
IRF1-210ENST00000493208 CASTOR2A6NHX0 329 aa14.88□□□□□ -0.03
IRF1-210ENST00000493208 TMEM189-UBE2V1I3L0A0 370 aa14.88□□□□□ -0.03
IRF1-210ENST00000493208 K7ELQ4 463 aaPredicted RBP14.88□□□□□ -0.03
IRF1-210ENST00000493208 SLC16A4O15374 487 aa14.88□□□□□ -0.03
IRF1-210ENST00000493208 TEX28O15482 410 aa14.88□□□□□ -0.03
IRF1-210ENST00000493208 LILRB3O75022 631 aa14.88□□□□□ -0.03
IRF1-210ENST00000493208 B3GAT3O94766 335 aa14.88□□□□□ -0.03
IRF1-210ENST00000493208 CD2BP2O95400 341 aaKnown RBP14.88□□□□□ -0.03
IRF1-210ENST00000493208 RPL9P32969 192 aaKnown RBP14.88□□□□□ -0.03
IRF1-210ENST00000493208 SLC12A3P55017 1021 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms