RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CYTH2Q99418 400 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 HACD3Q9P035 362 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 MINPP1Q9UNW1 487 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 DENND3A2RUS2 1198 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SEC31AO94979 1220 aaKnown RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SBK1Q52WX2 424 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PPP6R3Q5H9R7 873 aaPredicted RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 ICE2Q659A1 982 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 TWF2Q6IBS0 349 aaKnown RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PHF2O75151 1096 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 DEAF1O75398 565 aaPredicted RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SLC16A2P36021 539 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 CCDC126Q96EE4 140 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 ANKRD27Q96NW4 1050 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SENP7Q9BQF6 1050 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 TYK2P29597 1187 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 NPEPPSP55786 919 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 POLE2P56282 527 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 TMED1Q13445 227 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 MRPL1Q9BYD6 325 aaKnown RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 UTP6Q9NYH9 597 aaKnown RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SELENONQ9NZV5 590 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 AGO2Q9UKV8 859 aaKnown RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 MTO1Q9Y2Z2 717 aaKnown RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 CDY2AQ9Y6F7 541 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 CDY1Q9Y6F8 540 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 RFC5P40937 340 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 CNGA3Q16281 694 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 MFSD14CQ5VZR4 134 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 RASSF3Q86WH2 238 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PPP2R3CQ969Q6 453 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 C19orf81C9J6K1 198 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 ZMYND10O75800 440 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 GSNP06396 782 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 NLRP14Q86W24 1093 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 C18orf8Q96DM3 657 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PLEKHA5Q9HAU0 1116 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SNX12Q9UMY4 172 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PTPROQ16827 1216 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PROSER3Q2NL68 480 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SP8Q8IXZ3 490 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 MB21D2Q8IYB1 491 aaPredicted RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SPATA4Q8NEY3 305 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 PGBD4Q96DM1 585 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 EIF2AK1Q9BQI3 630 aaKnown RBP9.34□□□□□ -0.91
LSAMP-205ENST00000490035 RALBP11234 206 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 CDO1Q16878 200 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 STAG2Q8N3U4 1231 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 DYRK4Q9NR20 520 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ZFATQ9P243 1243 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 HEY1Q9Y5J3 304 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 CLRN2A0PK11 232 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 DIAPH2O60879 1101 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 GH2P01242 217 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 MTFR1Q15390 333 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 UBE2SQ16763 222 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 UGT3A1Q6NUS8 523 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 LINC00523Q86TU6 105 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 LRRC43Q8N309 656 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 AGPAT1Q99943 283 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 TJP2Q9UDY2 1190 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ZNF335Q9H4Z2 1342 aaPredicted RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 SFR1Q86XK3 245 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 CCNJLQ8IV13 435 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 PDLIM2Q96JY6 352 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 JPH1Q9HDC5 661 aaPredicted RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 APEX2Q9UBZ4 518 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ROBO2Q9HCK4 1378 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 GDF11O95390 407 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 CENPCQ03188 943 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 CTTNQ14247 550 aaKnown RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 SEPT8Q92599 483 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 LXNQ9BS40 222 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 GID8Q9NWU2 228 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 TNS3Q68CZ2 1445 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 IQGAP1P46940 1657 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 CYP27A1Q02318 531 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 SGSM1Q2NKQ1 1148 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ANGPTL8Q6UXH0 198 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 GRAMD1CQ8IYS0 662 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 NAT9Q9BTE0 207 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 EPC1Q9H2F5 836 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 NMRK1Q9NWW6 199 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ANGPT2O15123 496 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 MEI1Q5TIA1 1274 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ZNF556Q9HAH1 456 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 WARS2Q9UGM6 360 aaKnown RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 WDR91A4D1P6 747 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 C3orf70A6NLC5 250 aaPredicted RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 PSMD7P51665 324 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ARMC2Q8NEN0 867 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 FAR2Q96K12 515 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 DCP1AQ9NPI6 582 aaPredicted RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 ADA2Q9NZK5 511 aa9.33□□□□□ -0.92
LSAMP-205ENST00000490035 PAK5Q9P286 719 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms