RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 SMAP1Q8IYB5 467 aaPredicted RBP5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 ASB15Q8WXK1 588 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 TNPO1Q92973 898 aaKnown RBP5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 DVL3Q92997 716 aaPredicted RBP5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 WNK4Q96J92 1243 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 MAP7D2Q96T17 732 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 AMNQ9BXJ7 453 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 RTFDC1Q9BY42 306 aaPredicted RBP5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 SLC12A5Q9H2X9 1139 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 CD248Q9HCU0 757 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 UCKL1Q9NWZ5 548 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 LUZP4Q9P127 313 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 KCNG1Q9UIX4 513 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 MYRFQ9Y2G1 1151 aa5.91□□□□□ -1.46
CHCHD3-205ENST00000481152 DLG5Q8TDM6 1919 aa5.9□□□□□ -1.46
CHCHD3-205ENST00000481152 NEO1Q92859 1461 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 CPSF1Q10570 1443 aaKnown RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 A0A1W2PP64 1363 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 ABCC4O15439 1325 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 DYTNA2CJ06 578 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 RASSF10A6NK89 507 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 FOXP2O15409 715 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 RNASEH2AO75792 299 aaKnown RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 ZRANB2O95218 330 aaKnown RBP eCLIP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 U2AF1L5P0DN76 240 aaPredicted RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 SRGNP10124 158 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 VDRP11473 427 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 ADCY8P40145 1251 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 CASP2P42575 452 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 PURAQ00577 322 aaKnown RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 U2AF1Q01081 240 aaKnown RBP eCLIP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 EXOSC9Q06265 439 aaKnown RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 RABEP1Q15276 862 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 ZNF568Q3ZCX4 644 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 IL31Q6EBC2 164 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 LRSAM1Q6UWE0 723 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 CPXCR1Q8N123 301 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 AFAP1L2Q8N4X5 818 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 MAGEB6Q8N7X4 407 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 C2orf69Q8N8R5 385 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 DLG3Q92796 817 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 TRIM44Q96DX7 344 aaPredicted RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 HOOK2Q96ED9 719 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 CLUHP3Q96NS8 147 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 LMF1Q96S06 567 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 BTBD2Q9BX70 525 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 PANK2Q9BZ23 570 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 ZDHHC5Q9C0B5 715 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 RSPH9Q9H1X1 276 aaPredicted RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 PDCL3Q9H2J4 239 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 FBXO10Q9UK96 956 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 CACNA1FO60840 1977 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 MAP2P11137 1827 aaKnown RBP5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 TUBGCP6Q96RT7 1819 aa5.9□□□□□ -1.47
CHCHD3-205ENST00000481152 TMEM131LA2VDJ0 1609 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 CDK12Q9NYV4 1490 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 E2F8A0AVK6 867 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 PATE3B3GLJ2 98 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 HIP1RO75146 1068 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 OFD1O75665 1012 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 HSP90AB1P08238 724 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 SDHAP31040 664 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 ECE1P42892 770 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 NEK3P51956 506 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 IRF9Q00978 393 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 PUM1Q14671 1186 aaKnown RBP eCLIP5.89□□□□□ -1.476e-8■□□□□ 8.2
CHCHD3-205ENST00000481152 SLC4A8Q2Y0W8 1093 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 FNDC3BQ53EP0 1204 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 KANK2Q63ZY3 851 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 MTERF4Q7Z6M4 381 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 ZSCAN30Q86W11 494 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 CREBRFQ8IUR6 639 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 ITPRIPQ8IWB1 547 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 TMEM57Q8N5G2 664 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 CCDC89Q8N998 374 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 ANKRD42Q8N9B4 389 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 HIPK4Q8NE63 616 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 NGDNQ8NEJ9 315 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 ANP32BQ92688 251 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 PDLIM2Q96JY6 352 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 GNRHR2Q96P88 292 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 LRRC37BQ96QE4 947 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 BOCQ9BWV1 1114 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 OR10A5Q9H207 317 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 AASDHPPTQ9NRN7 309 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 GTF2A1LQ9UNN4 478 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 TNNQ9UQP3 1299 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 RRP7AQ9Y3A4 280 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 N4BP2Q86UW6 1770 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 PREX1Q8TCU6 1659 aa5.89□□□□□ -1.47
CHCHD3-205ENST00000481152 ARHGEF40Q8TER5 1519 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 AATKQ6ZMQ8 1374 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 PRAMEF22A3QJZ6 481 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 B4E1Z4 1266 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 C1QTNF3-AMACRE9PGA6 284 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 HMGCRP04035 888 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 NBPF7P0C2Y1 421 aaPredicted RBP5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 ZNF853P0CG23 659 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 IGFALSP35858 605 aa5.88□□□□□ -1.47
CHCHD3-205ENST00000481152 HTR3AP46098 478 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms