RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 INO80B-WBP1J3KQ70 363 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 FAM189A1O60320 539 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 EVI5O60447 810 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 C4BPAP04003 597 aaKnown RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 EDN1P05305 212 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 MCF2P10911 925 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 KCNA4P22459 653 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 MATR3P43243 847 aaKnown RBP eCLIP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 PSMC4P43686 418 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 IGBP1P78318 339 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 GCNT1Q02742 428 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 MAP2K1Q02750 393 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 MFSD10Q14728 455 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 PRAMEF19Q5SWL8 479 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 ATF7IP2Q5U623 682 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 GJB7Q6PEY0 223 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 ZNF571Q7Z3V5 609 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 WDR49Q8IV35 697 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 KAT2BQ92831 832 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 WDR24Q96S15 920 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 INO80BQ9C086 356 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 UPF3AQ9H1J1 476 aaKnown RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 IFT122Q9HBG6 1241 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 UBE2TQ9NPD8 197 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 ANKFY1Q9P2R3 1169 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 AKT3Q9Y243 479 aa11.91□□□□□ -0.5
VTI1A-204ENST00000480057 UQCRHLA0A096LP55 91 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 ANO9A1A5B4 782 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 DYNC1I1O14576 645 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 CTIFO43310 598 aaKnown RBP11.9□□□□□ -0.5
VTI1A-204ENST00000480057 IL18RAPO95256 599 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 UQCRHP07919 91 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 SMIM10L2AP0DMW4 78 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 SMIM10L2BP0DMW5 78 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 DLATP10515 647 aaKnown RBP11.9□□□□□ -0.5
VTI1A-204ENST00000480057 GNAT1P11488 350 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 CYBAP13498 195 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 CTGFP29279 349 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 ACOT2P49753 483 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 PSEN2P49810 448 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 GJA9P57773 515 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 ADAM17P78536 824 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 CYP27A1Q02318 531 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 GFPT1Q06210 699 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-204ENST00000480057 NAB2Q15742 525 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 AMHR2Q16671 573 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 KIAA0753Q2KHM9 967 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 DEFB115Q30KQ5 88 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 WDR44Q5JSH3 913 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 NFRKBQ6P4R8 1299 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-204ENST00000480057 ARHGEF19Q8IW93 802 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 FAM71AQ8IYT1 594 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 KIAA0319LQ8IZA0 1049 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 SLC35F6Q8N357 371 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 TRIM58Q8NG06 486 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 HELQQ8TDG4 1101 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 SHC3Q92529 594 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 SEMA4DQ92854 862 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 SECISBP2LQ93073 1101 aaKnown RBP11.9□□□□□ -0.5
VTI1A-204ENST00000480057 FAXDC2Q96IV6 333 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 NAPGQ99747 312 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-204ENST00000480057 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 TCHPQ9BT92 498 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 GUCA1BQ9UMX6 200 aa11.9□□□□□ -0.5
VTI1A-204ENST00000480057 EVPLQ92817 2033 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 A0A087WZ62 844 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 A0A087X0T9 212 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 FOXN3O00409 490 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-204ENST00000480057 FANCGO15287 622 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 B4GALT4O60513 344 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 TACC1O75410 805 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
VTI1A-204ENST00000480057 RPLP2P05387 115 aaKnown RBP11.89□□□□□ -0.51
VTI1A-204ENST00000480057 CLTAP09496 248 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 FAM228BP0C875 321 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 TNNI1P19237 187 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 HOXC8P31273 242 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 ARID5AQ03989 594 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
VTI1A-204ENST00000480057 ZNF568Q3ZCX4 644 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-204ENST00000480057 NME8Q8N427 588 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 SLC30A5Q8TAD4 765 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 LMBR1Q8WVP7 490 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 ATRIPQ8WXE1 791 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 ZNF516Q92618 1163 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 ERO1AQ96HE7 468 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
VTI1A-204ENST00000480057 CAPNS2Q96L46 248 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 ZIC5Q96T25 663 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 FDXACB1Q9BRP7 624 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms