RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 RNF207Q6ZRF8 634 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 CLEC17AQ6ZS10 378 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 KCTD1Q719H9 257 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 MCF2L2Q86YR7 1114 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 TBC1D10CQ8IV04 446 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 FBXO16Q8IX29 292 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 SLC43A3Q8NBI5 491 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 CYB5D2Q8WUJ1 264 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 RUFY2Q8WXA3 655 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 BADQ92934 168 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 FERMT2Q96AC1 680 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 TRIM43Q96BQ3 446 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 TMX3Q96JJ7 454 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 FAM227BQ96M60 508 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 TMEM47Q9BQJ4 181 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 UBAC1Q9BSL1 405 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 UPF3BQ9BZI7 483 aaKnown RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 KAT14Q9H8E8 782 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 IL17RBQ9NRM6 502 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 C19orf73Q9NVV2 129 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 CTNND2Q9UQB3 1225 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 PTPRSQ13332 1948 aa4.84□□□□□ -1.64
VPS13D-206ENST00000476045 TNKSO95271 1327 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 PTPDC1A2A3K4 754 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ZNF213O14771 459 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 F13A1P00488 732 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 CD4P01730 458 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 PF4P02776 101 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ACTN1P12814 892 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 FOSL2P15408 326 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ETV3P41162 512 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 CDK7P50613 346 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ZNF445P59923 1031 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 CNTN2Q02246 1040 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 GHRHRQ02643 423 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ZP2Q05996 745 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 CCDC173Q0VFZ6 552 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 TRDNQ13061 729 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ITGA7Q13683 1181 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 MPP2Q14168 576 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 SHHQ15465 462 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 CDC37Q16543 378 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 GAB4Q2WGN9 574 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ZSCAN23Q3MJ62 389 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 RRP12Q5JTH9 1297 aaKnown RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 VPS53Q5VIR6 699 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 NFRKBQ6P4R8 1299 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 KCNV1Q6PIU1 500 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 SLC30A10Q6XR72 485 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ZNF589Q86UQ0 364 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 TEX2Q8IWB9 1127 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 MAFAQ8NHW3 353 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 CAGE1Q8TC20 777 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 GPT2Q8TD30 523 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 TMEM40Q8WWA1 233 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ANKS1AQ92625 1134 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 ANP32BQ92688 251 aaKnown RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 Q96M66 194 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 HSPA12BQ96MM6 686 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 GUCD1Q96NT3 240 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 IWS1Q96ST2 819 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 MTA3Q9BTC8 594 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 KATNAL1Q9BW62 490 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 IL25Q9H293 177 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 HIPK3Q9H422 1215 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 IL23AQ9NPF7 189 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 MAP3K20Q9NYL2 800 aaKnown RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 TPX2Q9ULW0 747 aaKnown RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 POLR3KQ9Y2Y1 108 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-206ENST00000476045 REV3LO60673 3130 aa4.83□□□□□ -1.64
VPS13D-206ENST00000476045 MYH9P35579 1960 aaKnown RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 DOCK5Q9H7D0 1870 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 ASTN1O14525 1302 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 FRMPD2Q68DX3 1309 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 ERICH2A1L162 156 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 NFIBO00712 420 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 CTAGE5O15320 804 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 ADCY6O43306 1168 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 NMT2O60551 498 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 DTNBO60941 627 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 EFCAB14O75071 495 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 BAIAP3O94812 1187 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 PARP1P09874 1014 aaKnown RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 MCM2P49736 904 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 HAND2P61296 217 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 RPS6P62753 249 aaKnown RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 TNK2Q07912 1038 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 RBL2Q08999 1139 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 BFSP2Q13515 415 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 CUL4AQ13619 759 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 BAATQ14032 418 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 MUM1L1Q5H9M0 696 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 C9orf50Q5SZB4 431 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 IFIT1BQ5T764 474 aaKnown RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 TAPT1Q6NXT6 567 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms