RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RASA4BC9J798 803 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 MEIS1O00470 390 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 RASA4O43374 803 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 ECE2O60344 883 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 GCNT3O95395 438 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 ASMTLO95671 621 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 LMNAP02545 664 aaKnown RBP19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 DLATP10515 647 aaKnown RBP19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 CBWD6Q4V339 395 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 CBWD3Q5JTY5 395 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 CBWD5Q5RIA9 395 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 RFWD3Q6PCD5 774 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 FAM186BQ8IYM0 893 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 PWWP2AQ96N64 755 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 AGPAT1Q99943 283 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 ZNF287Q9HBT7 754 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 ACTL7BQ9Y614 415 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 C10orf71Q711Q0 1435 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 MARK3P27448 753 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 SNX30Q5VWJ9 437 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 C4orf50Q6ZRC1 276 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 ARHGAP22Q7Z5H3 698 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 CATSPER3Q86XQ3 398 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 C1orf54Q8WWF1 131 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 WNT8AQ9H1J5 351 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 TLE6Q9H808 572 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 APEX2Q9UBZ4 518 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 TGFB1I1O43294 461 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 PPP1R11O60927 126 aaPredicted RBP19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 GSTA2P09210 222 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 ITIH2P19823 946 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 ITGA8P53708 1063 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 KIF22Q14807 665 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 C10orf82Q8WW14 230 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 NRG4Q8WWG1 115 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 SLCO2A1Q92959 643 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 BICD1Q96G01 975 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 FAM210AQ96ND0 272 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 MIPEPQ99797 713 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 PPP1R12CQ9BZL4 782 aa19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 DDX60LQ5H9U9 1706 aaKnown RBP19.87■□□□□ 0.77
ECHDC1-214ENST00000474289 UBAP1LF5GYI3 381 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 FOXN3O00409 490 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 ATP9AO75110 1047 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 LDHBP07195 334 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 IVDP26440 423 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 PTPN4P29074 926 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 KCNQ4P56696 695 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 CCDC6Q16204 474 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 TAF1BQ53T94 588 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 ZC3H12AQ5D1E8 599 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 C16orf86Q6ZW13 317 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 PRUNE1Q86TP1 453 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 ANKRD35Q8N283 1001 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 SNF8Q96H20 258 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 RUSC1Q9BVN2 902 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 INTS2Q9H0H0 1204 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 EURLQ9NYK6 297 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 MYO3BQ8WXR4 1341 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 ATMINO43313 823 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 SPAG7O75391 227 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 KCNA3P22001 575 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 PSMC2P35998 433 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 GPC5P78333 572 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 RCN1Q15293 331 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 RBM26Q5T8P6 1007 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 TBC1D9BQ66K14 1250 aa19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 RPUSD2Q8IZ73 545 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 SYT2Q8N9I0 419 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 MARCH10Q8NA82 808 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 SCG3Q8WXD2 468 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 TMX4Q9H1E5 349 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-214ENST00000474289 CLDN3O15551 220 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 SKIP12755 728 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 OCRLQ01968 901 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 TCEAL1Q15170 157 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 TMED2Q15363 201 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 TRIP13Q15645 432 aaPredicted RBP19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 DSTYKQ6XUX3 929 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 ZC3H18Q86VM9 953 aaKnown RBP19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 BTBD6Q96KE9 485 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 A0A1W2PRG0 241 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 SPOPO43791 374 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 EDF1O60869 148 aaKnown RBP19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 CACNA2D1P54289 1103 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 CDR2Q01850 454 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 SGO2Q562F6 1265 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 ZNF746Q6NUN9 644 aaPredicted RBP19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 CLEC4GQ6UXB4 293 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 RBM41Q96IZ5 413 aaKnown RBP19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 GRID1Q9ULK0 1009 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 ZMYM2Q9UBW7 1377 aa19.85■□□□□ 0.77
ECHDC1-214ENST00000474289 TRIM49P0CI25 452 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 TRIM49CP0CI26 452 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 PHLDB3Q6NSJ2 640 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 PPP1R18Q6NYC8 613 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 CCNJLQ8IV13 435 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 GPCPD1Q9NPB8 672 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 LNPEPQ9UIQ6 1025 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 DNM3Q9UQ16 869 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms