RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 CTNND2Q9UQB3 1225 aa17.5■□□□□ 0.39
PCOLCE-205ENST00000472348 GIT1Q9Y2X7 761 aa17.5■□□□□ 0.39
PCOLCE-205ENST00000472348 PCDHB2Q9Y5E7 798 aa17.5■□□□□ 0.39
PCOLCE-205ENST00000472348 COL4A6Q14031 1691 aa17.5■□□□□ 0.39
PCOLCE-205ENST00000472348 ZNF233A6NK53 670 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 BMP8BP34820 402 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 PSMC2P35998 433 aaKnown RBP17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 PMS1P54277 932 aaKnown RBP17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 TMEM240Q5SV17 173 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 RASIP1Q5U651 963 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 KLHL10Q6JEL2 608 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 C16orf59Q7L2K0 433 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 DEFB128Q7Z7B8 93 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 NPAS4Q8IUM7 802 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 FAM114A1Q8IWE2 563 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 CSGALNACT2Q8N6G5 542 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 SMG8Q8ND04 991 aaKnown RBP17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 FAM200AQ8TCP9 573 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 LINC01599Q8WXQ3 324 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 ZBTB45Q96K62 511 aaPredicted RBP17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 MFSD14AQ96MC6 490 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 ACAP3Q96P50 834 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 MED15Q96RN5 788 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 TSPY26PQ9H489 355 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 FRMD4BQ9Y2L6 1034 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 IPPQ9Y573 584 aa17.49■□□□□ 0.39
PCOLCE-205ENST00000472348 TRIP11Q15643 1979 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 CARNS1A5YM72 827 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 EXOC3O60645 756 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 IL18RAPO95256 599 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 NPTXRO95502 500 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 YARSP54577 528 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 CLDN10P78369 228 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 PPP2R3AQ06190 1150 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 IQCB1Q15051 598 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 CRELD2Q6UXH1 353 aaPredicted RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 ALKAL1Q6UXT8 129 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 C11orf57Q6ZUT1 292 aaPredicted RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 INTS8Q75QN2 995 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 FRMD5Q7Z6J6 570 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 BRSK2Q8IWQ3 736 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 TMC2Q8TDI7 906 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 TOP1MTQ969P6 601 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 GDF15Q99988 308 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 DERAQ9Y315 318 aa17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 TDRD15B5MCY1 1934 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
PCOLCE-205ENST00000472348 PTPRSQ13332 1948 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 TTC26A0AVF1 554 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 TRIM49BA6NDI0 452 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 CLIC2O15247 247 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 AMHP03971 560 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 ITGA4P13612 1032 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 EEF1GP26641 437 aaKnown RBP17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 MAGEA10P43363 369 aaPredicted RBP17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 AP3M2P53677 418 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 SPAG1Q07617 926 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 SNRNP35Q16560 246 aaKnown RBP17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 BORCS6Q96GS4 357 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 SLC9A7Q96T83 725 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
PCOLCE-205ENST00000472348 TISP43B9A030 160 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 EPB41P11171 864 aaKnown RBP17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 KCNE1P15382 129 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 WDR5P61964 334 aaKnown RBP17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 NCAPHQ15003 741 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 PSMD6Q15008 389 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 ZNF365Q70YC5 407 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■□□□□ 8.2
PCOLCE-205ENST00000472348 SRRTQ9BXP5 876 aaKnown RBP17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 PRO3102Q9H379 93 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 RPF1Q9H9Y2 349 aaKnown RBP17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 CNTN3Q9P232 1028 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 C2CD2Q9Y426 696 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 NFE2L3Q9Y4A8 694 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 PCDHB7Q9Y5E2 793 aa17.46■□□□□ 0.39
PCOLCE-205ENST00000472348 LRRC10BA6NIK2 292 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 PMM2O15305 246 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 AKAP3O75969 853 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 KCNJ6P48051 423 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 TPD52L1Q16890 204 aaPredicted RBP17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 TCTN1Q2MV58 587 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 CDKAL1Q5VV42 579 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 AGMOQ6ZNB7 445 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 ZBTB33Q86T24 672 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 CDR2LQ86X02 465 aaPredicted RBP17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 THNSL1Q8IYQ7 743 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 GZF1Q9H116 711 aaPredicted RBP17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 IKZF4Q9H2S9 585 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 NXF3Q9H4D5 531 aaKnown RBP17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 RSAD1Q9HA92 442 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 USP20Q9Y2K6 914 aa17.45■□□□□ 0.38
PCOLCE-205ENST00000472348 BECN2A8MW95 431 aa17.44■□□□□ 0.38
PCOLCE-205ENST00000472348 XPOTO43592 962 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms