RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 CENPFP49454 3210 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 VPS8Q8N3P4 1428 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 K7ESF4 209 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 KLHL18O94889 574 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 HSP90B1P14625 803 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 CCND1P24385 295 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 MAP2K2P36507 400 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 TXKP42681 527 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 LGALS4P56470 323 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 BCAR1P56945 870 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 SRSF2Q01130 221 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 NFATC3Q12968 1075 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 TRIM25Q14258 630 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 FSCN1Q16658 493 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 CIAPIN1Q6FI81 312 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 CXXC5Q7LFL8 322 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 LYSMD2Q8IV50 215 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 RAVER1Q8IY67 606 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 CARFQ8N187 725 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 TP53I13Q8NBR0 393 aaPredicted RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 TXNDC5Q8NBS9 432 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 P2RX7Q99572 595 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 NOL10Q9BSC4 688 aaKnown RBP6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 DNAJC28Q9NX36 388 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 MKS1Q9NXB0 559 aa6.53□□□□□ -1.36
CACNA1C-223ENST00000465278 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 RGPD5Q99666 1765 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 DLEC1Q9Y238 1755 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 ST20-MTHFSA0A0A6YYL1 179 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 SH3D21A4FU49 640 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 ZNF28P17035 718 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 ENPP1P22413 925 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 CDK17Q00537 523 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 ACAP2Q15057 778 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 TTF1Q15361 905 aaPredicted RBP6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 GRAMD4Q6IC98 578 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 C1orf162Q8NEQ5 155 aaPredicted RBP6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 ACAP3Q96P50 834 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 TMEM168Q9H0V1 697 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 KCMF1Q9P0J7 381 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 DENND2AQ9ULE3 1009 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 NUMBLQ9Y6R0 609 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 DOT1LQ8TEK3 1739 aa6.52□□□□□ -1.37
CACNA1C-223ENST00000465278 A0A0A6YYJ9 748 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 A0A0G2JNJ9 132 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PCDHGA12O60330 932 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 OPHN1O60890 802 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 S100BP04271 92 aaPredicted RBP6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 CHGBP05060 677 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 CFPP27918 469 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 STAT5BP51692 787 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 CCT2P78371 535 aaKnown RBP6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 ODR4Q5SWX8 454 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 TCERG1LQ5VWI1 586 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 LINC01356Q8N9X3 169 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 GAB3Q8WWW8 586 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 KCTD10Q9H3F6 313 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 AASDHPPTQ9NRN7 309 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 SAE1Q9UBE0 346 aaPredicted RBP6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 Q9UFV3 132 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PRSS50Q9UI38 385 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 DNAI1Q9UI46 699 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 ABT1Q9ULW3 272 aaKnown RBP6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PCDHGA9Q9Y5G4 932 aaKnown RBP6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PCDHGA8Q9Y5G5 932 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PCDHGA7Q9Y5G6 932 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PCDHGA6Q9Y5G7 932 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PCDHGA3Q9Y5H0 932 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 PCDHGA2Q9Y5H1 932 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 HTTP42858 3142 aa6.51□□□□□ -1.37
CACNA1C-223ENST00000465278 SHTN1A0MZ66 631 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 XPOTO43592 962 aaKnown RBP6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 PFKMP08237 780 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 CELA3BP08861 270 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 OSMP13725 252 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 SLURP1P55000 103 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 TGFB2P61812 414 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 PPARAQ07869 468 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 ODF1Q14990 250 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 DGKDQ16760 1214 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 RGL3Q3MIN7 710 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 Q6ZUG5 572 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 GAREM2Q75VX8 874 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 CTU1Q7Z7A3 348 aaKnown RBP6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 PNMA8AQ86V59 439 aaPredicted RBP6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 TMEM151BQ8IW70 566 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 AMOTL1Q8IY63 956 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 PPM1NQ8N819 430 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 ADAMTS17Q8TE56 1095 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 DYDC2Q96IM9 177 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 YTHDC1Q96MU7 727 aaKnown RBP6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 CCM2LQ9NUG4 571 aaPredicted RBP6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 PTPN22Q9Y2R2 807 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 C4AP0C0L4 1744 aa6.5□□□□□ -1.37
CACNA1C-223ENST00000465278 KIAA0100Q14667 2235 aaKnown RBP6.49□□□□□ -1.37
CACNA1C-223ENST00000465278 KIF1BO60333 1816 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms