RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CENPVL1A0A0U1RR11 272 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 DIRC3C9JPN6 131 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 K7ESF4 209 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 C1RP00736 705 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 HKR1P10072 659 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 ZBTB48P10074 688 aaPredicted RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 CLK3P49761 638 aaKnown RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 WNT3AP56704 352 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 IL2P60568 153 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 PCBP2Q15366 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
USH2A-203ENST00000463147 DDB1Q16531 1140 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 TMEM177Q53S58 311 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 FSTL4Q6MZW2 842 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 FBXO42Q6P3S6 717 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 BHLHA9Q7RTU4 235 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 DDX53Q86TM3 631 aaKnown RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 CXorf67Q86X51 503 aaPredicted RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 CCAR1Q8IX12 1150 aaKnown RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 JPH3Q8WXH2 748 aaPredicted RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 CAVIN3Q969G5 261 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 RPS6KC1Q96S38 1066 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 EPC1Q9H2F5 836 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 MYH16Q9H6N6 1097 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 THG1LQ9NWX6 298 aaKnown RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 B4GALT6Q9UBX8 382 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 DNAI1Q9UI46 699 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 ZNF180Q9UJW8 692 aa5.41□□□□□ -1.54
USH2A-203ENST00000463147 APOBEC2Q9Y235 224 aaKnown RBP5.41□□□□□ -1.54
USH2A-203ENST00000463147 PROB1E7EW31 1015 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 HOXA3O43365 443 aaPredicted RBP5.4□□□□□ -1.54
USH2A-203ENST00000463147 TGM5O43548 720 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 RFPL1O75677 317 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 ZSCAN20P17040 1043 aaPredicted RBP5.4□□□□□ -1.54
USH2A-203ENST00000463147 BMPR1AP36894 532 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 KIF11P52732 1056 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 ADCY1Q08828 1119 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 ODF1Q14990 250 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 VPS72Q15906 364 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 PTPN21Q16825 1174 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 PRR16Q569H4 304 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 SYCP2LQ5T4T6 812 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 PRAMEF9Q5VWM5 478 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 PAPD7Q5XG87 772 aaKnown RBP5.4□□□□□ -1.54
USH2A-203ENST00000463147 NXNQ6DKJ4 435 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 CCSAPQ6IQ19 270 aaPredicted RBP5.4□□□□□ -1.54
USH2A-203ENST00000463147 MICALCLQ6ZW33 695 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 TPH2Q8IWU9 490 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 CMIPQ8IY22 773 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 MAGEB6Q8N7X4 407 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 CLRN3Q8NCR9 226 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 MORC4Q8TE76 937 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 FUBP3Q96I24 572 aaKnown RBP eCLIP5.4□□□□□ -1.54
USH2A-203ENST00000463147 CCDC136Q96JN2 1154 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 CAMKK2Q96RR4 588 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 TUBGCP5Q96RT8 1024 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 NDC1Q9BTX1 674 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 IP6K2Q9UHH9 426 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 HDAC5Q9UQL6 1122 aa5.4□□□□□ -1.54
USH2A-203ENST00000463147 E2F8A0AVK6 867 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 CAND2O75155 1236 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 MT-CO1P00395 513 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 LSSP48449 732 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 ATP13A4Q4VNC1 1196 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 ZNF362Q5T0B9 420 aaPredicted RBP5.39□□□□□ -1.55
USH2A-203ENST00000463147 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 DOK3Q7L591 496 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 SMC5Q8IY18 1101 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 CHST14Q8NCH0 376 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 WDR11Q9BZH6 1224 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 R3HDMLQ9H3Y0 253 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 PCIF1Q9H4Z3 704 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 SYBUQ9NX95 663 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 SPEF1Q9Y4P9 236 aa5.39□□□□□ -1.55
USH2A-203ENST00000463147 COL11A2P13942 1736 aaPredicted RBP5.39□□□□□ -1.55
USH2A-203ENST00000463147 PTPDC1A2A3K4 754 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PCDHGA12O60330 932 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 HLA-DOAP06340 250 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 MYBL2P10244 700 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 BIRC2Q13490 618 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 EPHA7Q15375 998 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 GORABQ5T7V8 394 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 TIGD7Q6NT04 549 aaPredicted RBP5.38□□□□□ -1.55
USH2A-203ENST00000463147 GDF7Q7Z4P5 450 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PLXDC1Q8IUK5 500 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 OR52N2Q8NGI0 321 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 LINC00476Q8WZB0 136 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 SPATA5L1Q9BVQ7 753 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PITHD1Q9GZP4 211 aaPredicted RBP5.38□□□□□ -1.55
USH2A-203ENST00000463147 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 RSAD1Q9HA92 442 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PCDHGA9Q9Y5G4 932 aaKnown RBP5.38□□□□□ -1.55
USH2A-203ENST00000463147 PCDHGA8Q9Y5G5 932 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PCDHGA7Q9Y5G6 932 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PCDHGA6Q9Y5G7 932 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PCDHGA3Q9Y5H0 932 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 PCDHGA2Q9Y5H1 932 aa5.38□□□□□ -1.55
USH2A-203ENST00000463147 A0A0A6YYJ9 748 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 AHRRA9YTQ3 701 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 DVL2O14641 736 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 EIF5BO60841 1220 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms