RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CLASP2O75122 1294 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 LRRN2O75325 713 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 GGPS1O95749 300 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 UQCRHP07919 91 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 NR3C2P08235 984 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 SCG2P13521 617 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 IFNAR1P17181 557 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 IBSPP21815 317 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 CD52P31358 61 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 SSR1P43307 286 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 EPHA4P54764 986 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 ADAM17P78536 824 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 FANCCQ00597 558 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 PLCB3Q01970 1234 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 SP2Q02086 613 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 RING1Q06587 406 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 MGAT3Q09327 533 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 NTRK3Q16288 839 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 PFKFB3Q16875 520 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 KLHL40Q2TBA0 621 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 FBXO47Q5MNV8 452 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 ARHGEF16Q5VV41 709 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 NT5DC4Q86YG4 428 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 CCDC83Q8IWF9 413 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 SLC44A3Q8N4M1 653 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 MRPL43Q8N983 215 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 KDF1Q8NAX2 398 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 ZNF511Q8NB15 262 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 ZBTB44Q8NCP5 570 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 SYTL5Q8TDW5 730 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 RSAD2Q8WXG1 361 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 DDX1Q92499 740 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 DMRTB1Q96MA1 342 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 FAM129BQ96TA1 746 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 RMDN3Q96TC7 470 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 GPR20Q99678 358 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 FTHL17Q9BXU8 183 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 RNF26Q9BY78 433 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 EPC1Q9H2F5 836 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 MLXIPQ9HAP2 919 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 SPATA6Q9NWH7 488 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 GMEB2Q9UKD1 530 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 FBXO4Q9UKT5 387 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 NOL7Q9UMY1 257 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 PCDHB7Q9Y5E2 793 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 PCDHGA2Q9Y5H1 932 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 MIA3Q5JRA6 1907 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 DOCK5Q9H7D0 1870 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 C2orf71A6NGG8 1288 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 SRRM3A6NNA2 597 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 TBKBP1A7MCY6 615 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 GCOM1H8Y6P7 765 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 hCG_1984214I3L0E3 225 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 FZD6O60353 706 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 LILRB5O75023 590 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 DEXIO95424 95 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 CXCL14O95715 111 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 CFBP00751 764 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 LGALS2P05162 132 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 POLR2MP0CAP2 368 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 VSIG8P0DPA2 414 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 NAPAP54920 295 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 DAB2P98082 770 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 SATB1Q01826 763 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 KRT17Q04695 432 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 EHHADHQ08426 723 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 NONOQ15233 471 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 FAM102BQ5T8I3 360 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 WWC2Q6AWC2 1192 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 KCNV1Q6PIU1 500 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 UNQ6494/PRO21346Q6UXR6 183 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 TMC5Q6UXY8 1006 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 TSHZ1Q6ZSZ6 1077 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 RSPH3Q86UC2 560 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 EGFL6Q8IUX8 553 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 ZNF713Q8N859 430 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 FEZF2Q8TBJ5 459 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 GPR152Q8TDT2 470 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 CCDC12Q8WUD4 166 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 WASF1Q92558 559 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 CUL5Q93034 780 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 ALKBH8Q96BT7 664 aaKnown RBP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 TMX3Q96JJ7 454 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 MYCBPQ99417 103 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 FOXQ1Q9C009 403 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 TGIF2Q9GZN2 237 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 BCAS3Q9H6U6 928 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 PSTPIP2Q9H939 334 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 ZSCAN32Q9NX65 697 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 BARHL2Q9NY43 387 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 COL20A1Q9P218 1284 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 ORC3Q9UBD5 711 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 CDY2AQ9Y6F7 541 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 STK36Q9NRP7 1315 aa6.69□□□□□ -1.34
SMARCC1-204ENST00000462198 TAF4O00268 1085 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 GPR182O15218 404 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 MAFGO15525 162 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 KIF1CO43896 1103 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 DTNBO60941 627 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms