RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 KXD1Q9BQD3 176 aa12.99□□□□□ -0.33
PCYT1A-213ENST00000460827 DHX33Q9H6R0 707 aaKnown RBP12.99□□□□□ -0.33
PCYT1A-213ENST00000460827 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 HNRNPA1P09651 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 TDGF1P13385 188 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 PSMC5P62195 406 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 PFKPQ01813 784 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 RTP2Q5QGT7 225 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 BICD2Q8TD16 824 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 PSPC1Q8WXF1 523 aaKnown RBP12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 RABGGTAQ92696 567 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 COLEC11Q9BWP8 271 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 ADAM28Q9UKQ2 775 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
PCYT1A-213ENST00000460827 CYP3A7-CYP3A51PA0A087WV96 503 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 EML1O00423 815 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 TSPAN1O60635 241 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 NR1I2O75469 434 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 TDP2O95551 362 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 CYP3A7P24462 503 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 HOXA9P31269 272 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 CREMQ03060 361 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 MTAPQ13126 283 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 PPM1JQ5JR12 505 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 TPRG1Q6ZUI0 275 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 ZNF687Q8N1G0 1237 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 RNF149Q8NC42 400 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 TBCKQ8TEA7 893 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 SLC7A3Q8WY07 619 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 CLSTN3Q9BQT9 956 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 FAM126AQ9BYI3 521 aaPredicted RBP12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 WRAP73Q9P2S5 460 aaPredicted RBP12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 CACNG4Q9UBN1 327 aa12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
PCYT1A-213ENST00000460827 NID2Q14112 1375 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 CCDC196A0A1B0GTZ2 297 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 SLC30A4O14863 429 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 CCL16O15467 120 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 C8AP07357 584 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 SPEM2Q0P670 501 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 NTRK3Q16288 839 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 CCDC51Q96ER9 411 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 NELL2Q99435 816 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 PAAF1Q9BRP4 392 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 APOL6Q9BWW8 343 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 CSRNP2Q9H175 543 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 NXF3Q9H4D5 531 aaKnown RBP12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 GMEB2Q9UKD1 530 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 SETXQ7Z333 2677 aaKnown RBP12.96□□□□□ -0.33
PCYT1A-213ENST00000460827 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 ADAM12O43184 909 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 ERLIN2O94905 339 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 POU2F2P09086 479 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 AXLP30530 894 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 RFC5P40937 340 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 PTENP60484 403 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 ADCY1Q08828 1119 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 LPAL2Q16609 132 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 AMHR2Q16671 573 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 PPM1LQ5SGD2 360 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 NOTUMQ6P988 496 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 CCDC148Q8NFR7 591 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 NETO1Q8TDF5 533 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 CEP170P1Q96L14 293 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 PLA2G2FQ9BZM2 168 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 HEBP1Q9NRV9 189 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 RALYQ9UKM9 306 aaKnown RBP12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 PPME1Q9Y570 386 aa12.95□□□□□ -0.34
PCYT1A-213ENST00000460827 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 SF3B1O75533 1304 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 COL4A2P08572 1712 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 NCAM2O15394 837 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 ASAP2O43150 1006 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 XYLBO75191 536 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 TADA2AO75478 443 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 ECI2O75521 394 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 AKAP5P24588 427 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 GRIK3Q13003 919 aa12.94□□□□□ -0.34
PCYT1A-213ENST00000460827 PPP2R5CQ13362 524 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms