RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 TOPORSQ9NS56 1045 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-204ENST00000460696 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 PI4K2BG5E9Z4 385 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 TLR3O15455 904 aaKnown RBP12.43□□□□□ -0.42
NPHP4-204ENST00000460696 DGAT1O75907 488 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 RARRES1P49788 294 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 SEZ6Q53EL9 994 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 C6orf118Q5T5N4 469 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 BSPRYQ5W0U4 402 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 JAMLQ86YT9 394 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 CALR3Q96L12 384 aaKnown RBP12.43□□□□□ -0.42
NPHP4-204ENST00000460696 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 ZWILCHQ9H900 591 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 AKT3Q9Y243 479 aa12.43□□□□□ -0.42
NPHP4-204ENST00000460696 GMNCA6NCL1 334 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 YWHAEP62258 255 aaKnown RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 PRKCEQ02156 737 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 LRRC14Q15048 493 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ZRSR2Q15696 482 aaKnown RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 C1orf186Q6ZWK4 172 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ANKRD13AQ8IZ07 590 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 RUBCNQ92622 972 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 CDCA5Q96FF9 252 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 FAM81BQ96LP2 452 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ACP6Q9NPH0 428 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 CYP3A7-CYP3A51PA0A087WV96 503 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 CYP3A7P24462 503 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 LSP1P33241 339 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 MAN1A1P33908 653 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 FOXR1Q6PIV2 292 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 SH3BP5LQ7L8J4 393 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ERICH1Q86X53 443 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 CPA4Q9UI42 421 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 PPP1R9AQ9ULJ8 1098 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ASTN1O14525 1302 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 MDH1P40925 334 aaKnown RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 MAPK6Q16659 721 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 DHX38Q92620 1227 aaKnown RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 THOC1Q96FV9 657 aaKnown RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ANKRD36BP1Q96IX9 119 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 ERP44Q9BS26 406 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 APOL6Q9BWW8 343 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 MOV10L1Q9BXT6 1211 aaKnown RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 GANQ9H2C0 597 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 CNOT10Q9H9A5 744 aaKnown RBP12.42□□□□□ -0.42
NPHP4-204ENST00000460696 TBX20Q9UMR3 447 aa12.42□□□□□ -0.42
NPHP4-204ENST00000460696 COL18A1P39060 1754 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 MYH6P13533 1939 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
NPHP4-204ENST00000460696 CIITAP33076 1130 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 NPTX2P47972 431 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 MXRA7P84157 204 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 ADCY2Q08462 1091 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 DHX34Q14147 1143 aaKnown RBP12.41□□□□□ -0.42
NPHP4-204ENST00000460696 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
NPHP4-204ENST00000460696 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 CASC4Q6P4E1 433 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 RAET1EQ8TD07 263 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 KAT5Q92993 513 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 CLMNQ96JQ2 1002 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 TARS2Q9BW92 718 aaKnown RBP12.41□□□□□ -0.42
NPHP4-204ENST00000460696 CARD9Q9H257 536 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 KIAA1586Q9HCI6 787 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 KLHL14Q9P2G3 628 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 H7C0C1 242 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 ATP5OP48047 213 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 KRT81Q14533 505 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 BBOF1Q8ND07 529 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 TCP11Q8WWU5 503 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 SLC5A5Q92911 643 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 CCT8L2Q96SF2 557 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 ADAM33Q9BZ11 813 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 TMEM117Q9H0C3 514 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 INTUQ9ULD6 942 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 GOLGA8MH3BSY2 632 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 PSMD10O75832 226 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 VIL1P09327 827 aaKnown RBP12.41□□□□□ -0.42
NPHP4-204ENST00000460696 ERVK-9P63128 1117 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 KRT17Q04695 432 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 CCDC6Q16204 474 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 HGSNATQ68CP4 663 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 TATDN1Q6P1N9 297 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 SLC47A2Q86VL8 602 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 RFX6Q8HWS3 928 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 RHPN2Q8IUC4 686 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 SRRM1Q8IYB3 904 aaKnown RBP12.41□□□□□ -0.42
NPHP4-204ENST00000460696 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
NPHP4-204ENST00000460696 HSD17B14Q9BPX1 270 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 PDCD2LQ9BRP1 358 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 ADPGKQ9BRR6 497 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 TXNDC16Q9P2K2 825 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
NPHP4-204ENST00000460696 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms