RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 DNAJC14Q6Y2X3 702 aaPredicted RBP9.65□□□□□ -0.86
USP6NL-203ENST00000443016 RNF135Q8IUD6 432 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 EMILIN2Q9BXX0 1053 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 MRPL17Q9NRX2 175 aaKnown RBP9.65□□□□□ -0.86
USP6NL-203ENST00000443016 KLK14Q9P0G3 267 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 RAPGEFL1Q9UHV5 662 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 MUTYHQ9UIF7 546 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 IRAK3Q9Y616 596 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 CCDC169A6NNP5 214 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 CLASP2O75122 1294 aaKnown RBP9.64□□□□□ -0.87
USP6NL-203ENST00000443016 URODP06132 367 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 KLRC2P26717 231 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 PRPHP41219 470 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 EFNA5P52803 228 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 PKP1Q13835 747 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 KCNC3Q14003 757 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 CDCA2Q69YH5 1023 aaPredicted RBP9.64□□□□□ -0.87
USP6NL-203ENST00000443016 SYCE2Q6PIF2 218 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 BSNDQ8WZ55 320 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 GBP4Q96PP9 640 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 KIFC3Q9BVG8 833 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 FZD8Q9H461 694 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.64□□□□□ -0.87
USP6NL-203ENST00000443016 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 E9PMD0 336 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 N4BP3O15049 544 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 ITIH3Q06033 890 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 PTPN14Q15678 1187 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 CABP7Q86V35 215 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 PPFIBP1Q86W92 1011 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 COLGALT2Q8IYK4 626 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 MUC6Q6W4X9 2439 aa9.64□□□□□ -0.87
USP6NL-203ENST00000443016 K7ERI5 159 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 ACKR2O00590 384 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 PEX3P56589 373 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 RESTQ13127 1097 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 DMP1Q13316 513 aaPredicted RBP9.63□□□□□ -0.87
USP6NL-203ENST00000443016 FAM187BQ17R55 369 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 ZBTB33Q86T24 672 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 SUSD6Q92537 303 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 ZNF396Q96N95 335 aaPredicted RBP9.63□□□□□ -0.87
USP6NL-203ENST00000443016 COLEC11Q9BWP8 271 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 C11orf16Q9NQ32 467 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 MIOSQ9NXC5 875 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 SSX2IPQ9Y2D8 614 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 ZDBF2Q9HCK1 2354 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 PRR33A8MZF0 331 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 SOD2P04179 222 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 CNPP09543 421 aaKnown RBP9.63□□□□□ -0.87
USP6NL-203ENST00000443016 EPCAMP16422 314 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 GRIK3Q13003 919 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 ATAT1Q5SQI0 421 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 RARS2Q5T160 578 aaKnown RBP9.63□□□□□ -0.87
USP6NL-203ENST00000443016 APBB1IPQ7Z5R6 666 aaPredicted RBP9.63□□□□□ -0.87
USP6NL-203ENST00000443016 RIPOR3Q96MK2 946 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 NECTIN4Q96NY8 510 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 PLIN2Q99541 437 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 VN1R3Q9BXE9 311 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 NT5C3AQ9H0P0 336 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 S1PR5Q9H228 398 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 ADAM7Q9H2U9 754 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 PDZD7Q9H5P4 517 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 DZANK1Q9NVP4 752 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 SNTG2Q9NY99 539 aa9.63□□□□□ -0.87
USP6NL-203ENST00000443016 TTLL13PA6NNM8 815 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 TPD52L2O43399 206 aaKnown RBP9.62□□□□□ -0.87
USP6NL-203ENST00000443016 TADA2AO75478 443 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 WEE2P0C1S8 567 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 PYGBP11216 843 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 GLUD2P49448 558 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 ATP2C1P98194 919 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-203ENST00000443016 DSC1Q08554 894 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 RAD51AP2Q09MP3 1159 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 IL17AQ16552 155 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 ATL3Q6DD88 541 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 TMC5Q6UXY8 1006 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 C12orf76Q8N812 135 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-203ENST00000443016 RASSF8Q8NHQ8 419 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 RABGGTAQ92696 567 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 PBXIP1Q96AQ6 731 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 TCHPQ9BT92 498 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 KLHL42Q9P2K6 505 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 CDH22Q9UJ99 828 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 GDAQ9Y2T3 454 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 ZDHHC9Q9Y397 364 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 LOC730098B7Z3J9 87 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 INPPL1O15357 1258 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 HIP1RO75146 1068 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 RECQL4O94761 1208 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 THP07101 528 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 ADH1AP07327 375 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 KRT85P78386 507 aa9.62□□□□□ -0.87
USP6NL-203ENST00000443016 FOXD4L6Q3SYB3 417 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-203ENST00000443016 HERC4Q5GLZ8 1057 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-203ENST00000443016 ATF7IP2Q5U623 682 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms