RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 EIF2AK1Q9BQI3 630 aaKnown RBP13.22□□□□□ -0.29
TNXB-202ENST00000442721 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
TNXB-202ENST00000442721 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
TNXB-202ENST00000442721 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
TNXB-202ENST00000442721 SIT1Q9Y3P8 196 aa13.22□□□□□ -0.29
TNXB-202ENST00000442721 ZFP37Q9Y6Q3 630 aaPredicted RBP13.22□□□□□ -0.29
TNXB-202ENST00000442721 NUMBLQ9Y6R0 609 aa13.22□□□□□ -0.29
TNXB-202ENST00000442721 FRYLO94915 3013 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 CEP250Q9BV73 2442 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 GPR179Q6PRD1 2367 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 A0A1B0GUA9 196 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 CDKL5O76039 1030 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 NPTXRO95502 500 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 SP9P0CG40 484 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 GLULP15104 373 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 RPL17P18621 184 aaKnown RBP13.21□□□□□ -0.29
TNXB-202ENST00000442721 GLRA2P23416 452 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 STARD6P59095 220 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 SCRN1Q12765 414 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.29
TNXB-202ENST00000442721 SLC27A1Q6PCB7 646 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 DCLRE1AQ6PJP8 1040 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 C1orf210Q8IVY1 113 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 PJA1Q8NG27 643 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 KCNG4Q8TDN1 519 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 TNFRSF25Q93038 417 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 RMDN1Q96DB5 314 aa13.21□□□□□ -0.29
TNXB-202ENST00000442721 TRIM6Q9C030 488 aaPredicted RBP13.21□□□□□ -0.29
TNXB-202ENST00000442721 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNXB-202ENST00000442721 VWA8A3KMH1 1905 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 FAM205CA6NFA0 338 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 MARCH6O60337 910 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
TNXB-202ENST00000442721 HNRNPA1P09651 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNXB-202ENST00000442721 XBP1P17861 261 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 FSHRP23945 695 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 HOXA9P31269 272 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 RARRES1P49788 294 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 RTP2Q5QGT7 225 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 ZC3H14Q6PJT7 736 aaKnown RBP13.2□□□□□ -0.3
TNXB-202ENST00000442721 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
TNXB-202ENST00000442721 CDR2LQ86X02 465 aaPredicted RBP13.2□□□□□ -0.3
TNXB-202ENST00000442721 MAML2Q8IZL2 1156 aaPredicted RBP13.2□□□□□ -0.3
TNXB-202ENST00000442721 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 RABGGTAQ92696 567 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 FGF14Q92915 247 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 CLSTN3Q9BQT9 956 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 PAAF1Q9BRP4 392 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 RPP25Q9BUL9 199 aaKnown RBP13.2□□□□□ -0.3
TNXB-202ENST00000442721 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
TNXB-202ENST00000442721 FOXQ1Q9C009 403 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 KLK14Q9P0G3 267 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 CACNG4Q9UBN1 327 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 NOTCH4Q99466 2003 aa13.2□□□□□ -0.3
TNXB-202ENST00000442721 POTEMA6NI47 508 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 TADA2AO75478 443 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 POU2F2P09086 479 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 TUSC3Q13454 348 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 CDCA2Q69YH5 1023 aaPredicted RBP13.19□□□□□ -0.3
TNXB-202ENST00000442721 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
TNXB-202ENST00000442721 ST13P5Q8NFI4 369 aaPredicted RBP13.19□□□□□ -0.3
TNXB-202ENST00000442721 LNX1Q8TBB1 728 aaPredicted RBP13.19□□□□□ -0.3
TNXB-202ENST00000442721 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 POLR3FQ9H1D9 316 aaPredicted RBP13.19□□□□□ -0.3
TNXB-202ENST00000442721 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 PARP2Q9UGN5 583 aa13.19□□□□□ -0.3
TNXB-202ENST00000442721 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 PATJQ8NI35 1801 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 PTGESO14684 152 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 PFKFB2O60825 505 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 LRRN2O75325 713 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 KIF4AO95239 1232 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 GPC5P78333 572 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 NTHL1P78549 312 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 NR5A1Q13285 461 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 NAB2Q15742 525 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 KIAA2013Q8IYS2 634 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 SUMF1Q8NBK3 374 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 RUBCNQ92622 972 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 SHDQ96IW2 340 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 FZD8Q9H461 694 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
TNXB-202ENST00000442721 PCDHA12Q9UN75 941 aa13.18□□□□□ -0.3
TNXB-202ENST00000442721 KANSL1LA0AUZ9 987 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 MED19A0JLT2 244 aaPredicted RBP13.17□□□□□ -0.3
TNXB-202ENST00000442721 CASTOR2A6NHX0 329 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 ADAM12O43184 909 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 DTNBO60941 627 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 C8AP07357 584 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 XRCC6P12956 609 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNXB-202ENST00000442721 PRKCQQ04759 706 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms