RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 EDN1P05305 212 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 PRKCBP05771 671 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 CA3P07451 260 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 MYOGP15173 224 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 ADSSP30520 456 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 GPC3P51654 580 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 GSDMDP57764 484 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 ADAM17P78536 824 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 MBTD1Q05BQ5 628 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 HIC1Q14526 733 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 DCAF17Q5H9S7 520 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-203ENST00000434601 ZPBP2Q6X784 338 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 CCDC186Q7Z3E2 898 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 ZNF410Q86VK4 478 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 SESTD1Q86VW0 696 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-203ENST00000434601 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 CCDC150Q8NCX0 1101 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 PPP1R13LQ8WUF5 828 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 POMGNT1Q8WZA1 660 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 BORCS6Q96GS4 357 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 ZNF668Q96K58 619 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-203ENST00000434601 UHRF1Q96T88 793 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-203ENST00000434601 TARS2Q9BW92 718 aaKnown RBP12.28□□□□□ -0.44
LINC00539-203ENST00000434601 FAM49AQ9H0Q0 323 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-203ENST00000434601 PCIF1Q9H4Z3 704 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 KIAA0391O15091 583 aaKnown RBP12.27□□□□□ -0.45
LINC00539-203ENST00000434601 AFPP02771 609 aaKnown RBP12.27□□□□□ -0.45
LINC00539-203ENST00000434601 KRT13P13646 458 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 KCNJ6P48051 423 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 CDC42EP1Q00587 391 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 TBX2Q13207 712 aaPredicted RBP12.27□□□□□ -0.45
LINC00539-203ENST00000434601 TRIM14Q14142 442 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 HSP90AA2PQ14568 343 aaPredicted RBP12.27□□□□□ -0.45
LINC00539-203ENST00000434601 PTGISQ16647 500 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 SLFN12LQ6IEE8 588 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 RUFY4Q6ZNE9 571 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 INTS8Q75QN2 995 aaKnown RBP12.27□□□□□ -0.45
LINC00539-203ENST00000434601 MICALL1Q8N3F8 863 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 SAAL1Q96ER3 474 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 SCLT1Q96NL6 688 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 ERGIC2Q96RQ1 377 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 PPP1R16BQ96T49 567 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
LINC00539-203ENST00000434601 FZD8Q9H461 694 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 IFT122Q9HBG6 1241 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 PRMT7Q9NVM4 692 aaPredicted RBP12.27□□□□□ -0.45
LINC00539-203ENST00000434601 ANKFY1Q9P2R3 1169 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 GTF2IRD1Q9UHL9 959 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 STYXL1Q9Y6J8 313 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 XIRP2A4UGR9 3374 aa12.27□□□□□ -0.45
LINC00539-203ENST00000434601 A0A087WZ62 844 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 ACKR2O00590 384 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 TREHO43280 583 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 ADRB2P07550 413 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 NLRP11P59045 1033 aaKnown RBP12.26□□□□□ -0.45
LINC00539-203ENST00000434601 BFSP1Q12934 665 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 SYCP1Q15431 976 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
LINC00539-203ENST00000434601 FAM187BQ17R55 369 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 TCERG1LQ5VWI1 586 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 HERC6Q8IVU3 1022 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 GPD1LQ8N335 351 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 SLC35C1Q96A29 364 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 FBXL18Q96ME1 805 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 FDXACB1Q9BRP7 624 aaPredicted RBP12.26□□□□□ -0.45
LINC00539-203ENST00000434601 COG5Q9UP83 839 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 USP20Q9Y2K6 914 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00539-203ENST00000434601 CNTNAP2Q9UHC6 1331 aa12.26□□□□□ -0.45
LINC00539-203ENST00000434601 PTPRSQ13332 1948 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 BRWD1Q9NSI6 2320 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 A0A0B4J269 797 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 GOLGA8IPA6NC78 632 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 GOLGA8JA6NMD2 632 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 TLL1O43897 1013 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 EXTL3O43909 919 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 EFCAB14O75071 495 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 TOM1L1O75674 476 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 TPM1P09493 284 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 SELPP16109 830 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 COL9A1P20849 921 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 SFPQP23246 707 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 MATR3P43243 847 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 ZNF200P98182 395 aaPredicted RBP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 PRPF4BQ13523 1007 aaKnown RBP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 SNRNP35Q16560 246 aaKnown RBP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 KIZQ2M2Z5 673 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 ATF7IP2Q5U623 682 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 TSHZ1Q6ZSZ6 1077 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 SRGAP1Q7Z6B7 1085 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 PPFIBP1Q86W92 1011 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 CBWD2Q8IUF1 395 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 RDH13Q8NBN7 331 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 ZSWIM2Q8NEG5 633 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms