RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 VTNP04004 478 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 CLCN1P35523 988 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 CYLC1P35663 651 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-209ENST00000428574 GRM5P41594 1212 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 PRKCIP41743 596 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 ACLYP53396 1101 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 PPP3CAQ08209 521 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 TRIM32Q13049 653 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 PTK7Q13308 1070 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 KCNA10Q16322 511 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 NBPF20Q3BBV1 942 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 CBWD6Q4V339 395 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 CBWD3Q5JTY5 395 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 CBWD5Q5RIA9 395 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 LHX8Q68G74 356 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 NOTUMQ6P988 496 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 SLC27A1Q6PCB7 646 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 ZNF662Q6ZS27 426 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 USP38Q8NB14 1042 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 SLC43A3Q8NBI5 491 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 EHBP1Q8NDI1 1231 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 LMO3Q8TAP4 145 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 DHX38Q92620 1227 aaKnown RBP9.83□□□□□ -0.84
NR1I3-209ENST00000428574 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 GLT1D1Q96MS3 346 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 TCHPQ9BT92 498 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 STK33Q9BYT3 514 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 TMEM117Q9H0C3 514 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 INTS2Q9H0H0 1204 aaKnown RBP9.83□□□□□ -0.84
NR1I3-209ENST00000428574 CDT1Q9H211 546 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 PLEKHA5Q9HAU0 1116 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 SIX2Q9NPC8 291 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 PYCARDQ9ULZ3 195 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 DERAQ9Y315 318 aa9.83□□□□□ -0.84
NR1I3-209ENST00000428574 TREHO43280 583 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 IPO7O95373 1038 aaKnown RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 SERPING1P05155 500 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 EDN1P05305 212 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 CCDC175P0C221 793 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 TRIM49P0CI25 452 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 TRIM49CP0CI26 452 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 ARF4P18085 180 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 JAM2P57087 298 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 KRT83P78385 493 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 MRPS6P82932 125 aaKnown RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 GCNT1Q02742 428 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 SNX17Q15036 470 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 SFMBT2Q5VUG0 894 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 CXCL17Q6UXB2 119 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 SV2AQ7L0J3 742 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 RDH13Q8NBN7 331 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 SPDYE1Q8NFV5 336 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 TAF4BQ92750 862 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 CELF4Q9BZC1 486 aaKnown RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 HAPLN2Q9GZV7 340 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 LUC7LQ9NQ29 371 aaKnown RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 PAK6Q9NQU5 681 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-209ENST00000428574 CHST12Q9NRB3 414 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 AGPAT5Q9NUQ2 364 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 PHF24Q9UPV7 400 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 TRIM17Q9Y577 477 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
NR1I3-209ENST00000428574 A0A0U1RQG5 324 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 GOLGA8IPA6NC78 632 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 LRRC53A6NM62 1247 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 GOLGA8JA6NMD2 632 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 EIF3CLB5ME19 914 aaKnown RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 KBTBD13C9JR72 458 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 DNM1LO00429 736 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 EPHB6O15197 1021 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 B4GALT5O43286 388 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 LCA5LO95447 670 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 C4BPAP04003 597 aaKnown RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 GJB1P08034 283 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 IQCF3P0C7M6 154 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 FERP16591 822 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 SLC9A1P19634 815 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 TBXAS1P24557 533 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 STAT1P42224 750 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 GCLMP48507 274 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 KLK7P49862 253 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 MFAP3P55082 362 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 DLG4P78352 724 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 ITGA7Q13683 1181 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 PKN2Q16513 984 aaKnown RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 DUOXA2Q1HG44 320 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms