RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
MCF2L-211ENST00000413354 FAM13AO94988 1023 aa17.23■□□□□ 0.35
MCF2L-211ENST00000413354 KRT18P05783 430 aaKnown RBP17.23■□□□□ 0.35
MCF2L-211ENST00000413354 THP07101 528 aa17.23■□□□□ 0.35
MCF2L-211ENST00000413354 MARCKSP29966 332 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-211ENST00000413354 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
MCF2L-211ENST00000413354 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-211ENST00000413354 TOPORSQ9NS56 1045 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-211ENST00000413354 BLOC1S4Q9NUP1 217 aa17.23■□□□□ 0.35
MCF2L-211ENST00000413354 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
MCF2L-211ENST00000413354 FBXO2Q9UK22 296 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-211ENST00000413354 USP20Q9Y2K6 914 aa17.23■□□□□ 0.35
MCF2L-211ENST00000413354 GDAQ9Y2T3 454 aa17.23■□□□□ 0.35
MCF2L-211ENST00000413354 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-211ENST00000413354 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
MCF2L-211ENST00000413354 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
MCF2L-211ENST00000413354 MCF2P10911 925 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 ABCD1P33897 745 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 GRM5P41594 1212 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 GLUD2P49448 558 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 YARSP54577 528 aaKnown RBP17.22■□□□□ 0.35
MCF2L-211ENST00000413354 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
MCF2L-211ENST00000413354 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
MCF2L-211ENST00000413354 FAM173BQ6P4H8 233 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 MPZL3Q6UWV2 235 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 TAS1R3Q7RTX0 852 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 TMEM161BQ8NDZ6 487 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 AUTS2Q8WXX7 1259 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 KCNN1Q92952 543 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 ZNF396Q96N95 335 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-211ENST00000413354 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 REEP2Q9BRK0 252 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 TCHPQ9BT92 498 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 TARS2Q9BW92 718 aaKnown RBP17.22■□□□□ 0.35
MCF2L-211ENST00000413354 CDT1Q9H211 546 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 PARVGQ9HBI0 331 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 ADAM28Q9UKQ2 775 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 MUC3AQ02505 3323 aa17.22■□□□□ 0.35
MCF2L-211ENST00000413354 SF3B1O75533 1304 aaKnown RBP eCLIP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 PTGESO14684 152 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 MAPTP10636 758 aaKnown RBP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 NCKAP1LP55160 1127 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 MCM6Q14566 821 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 HSP90AA2PQ14568 343 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 SLC39A14Q15043 492 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 ARSHQ5FYA8 562 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 KIAA1841Q6NSI8 718 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 FUT10Q6P4F1 479 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 ZPBP2Q6X784 338 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 GPR65Q8IYL9 337 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 RNF168Q8IYW5 571 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 SUSD6Q92537 303 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 C1QTNF1Q9BXJ1 281 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 PTPRHQ9HD43 1115 aa17.21■□□□□ 0.35
MCF2L-211ENST00000413354 MTCL1Q9Y4B5 1905 aaKnown RBP17.21■□□□□ 0.35
MCF2L-211ENST00000413354 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 TADA2AO75478 443 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 TOM1L1O75674 476 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 BRD1O95696 1058 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 ADH1AP07327 375 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 PROZP22891 400 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 KLRC2P26717 231 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 DDIT3P35638 169 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 ZNF131P52739 623 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 DSG1Q02413 1049 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-211ENST00000413354 CREMQ03060 361 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 ITIH3Q06033 890 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
MCF2L-211ENST00000413354 STK38Q15208 465 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 USP41Q3LFD5 358 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 RRAGBQ5VZM2 374 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 SYCE2Q6PIF2 218 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 ELMSAN1Q6PJG2 1045 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 BICD1Q96G01 975 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 EPSTI1Q96J88 318 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 PHF7Q9BWX1 381 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-211ENST00000413354 CD320Q9NPF0 282 aa17.2■□□□□ 0.34
MCF2L-211ENST00000413354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.2■□□□□ 0.34
MCF2L-211ENST00000413354 PLXNA3P51805 1871 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 CASTOR2A6NHX0 329 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 K7ENM7 598 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 C2CD2LO14523 706 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 LILRB3O75022 631 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 EFEMP2O95967 443 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 ELAVL2Q12926 359 aaKnown RBP17.19■□□□□ 0.34
MCF2L-211ENST00000413354 CBX2Q14781 532 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-211ENST00000413354 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 HAUS6Q7Z4H7 955 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 ZBTB33Q86T24 672 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 LRRC15Q8TF66 581 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 SLC22A17Q8WUG5 538 aa17.19■□□□□ 0.34
MCF2L-211ENST00000413354 UROC1Q96N76 676 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms