RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 TLE1Q04724 770 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 CSRP2Q16527 193 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 FAM214AQ32MH5 1076 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 TAX1BP1Q86VP1 789 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 CCHCR1Q8TD31 782 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 CASKIN2Q8WXE0 1202 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 TIFAQ96CG3 184 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 IL17RAQ96F46 866 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 C12orf65Q9H3J6 166 aaKnown RBP8.1□□□□□ -1.11
PTPN12-202ENST00000407343 TDP1Q9NUW8 608 aa8.1□□□□□ -1.11
PTPN12-202ENST00000407343 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 CTNND1O60716 968 aaKnown RBP8.09□□□□□ -1.11
PTPN12-202ENST00000407343 TUSC2O75896 110 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 UBXN7O94888 489 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 SYN1P17600 705 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 USP14P54578 494 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 SP140Q13342 867 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 TCTN3Q6NUS6 607 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 CHST15Q7LFX5 561 aaPredicted RBP8.09□□□□□ -1.11
PTPN12-202ENST00000407343 TTC7BQ86TV6 843 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 DENND1CQ8IV53 801 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 OR5M3Q8NGP4 307 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 STON2Q8WXE9 905 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 CLPTM1LQ96KA5 538 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 FAM193BQ96PV7 902 aaPredicted RBP8.09□□□□□ -1.11
PTPN12-202ENST00000407343 RBM15Q96T37 977 aaKnown RBP eCLIP8.09□□□□□ -1.116e-7■■□□□ 12.1
PTPN12-202ENST00000407343 CGRRF1Q99675 332 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 NELFAQ9H3P2 528 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 C1orf112Q9NSG2 853 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 NCDNQ9UBB6 729 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 ACTL7AQ9Y615 435 aa8.09□□□□□ -1.11
PTPN12-202ENST00000407343 A0A0G2JLL6 359 aaPredicted RBP8.08□□□□□ -1.12
PTPN12-202ENST00000407343 HOXA3O43365 443 aaPredicted RBP8.08□□□□□ -1.12
PTPN12-202ENST00000407343 FOXS1O43638 330 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 B3GALT2O43825 422 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 GPR32O75388 356 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 DDCP20711 480 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 ALDH1A3P47895 512 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 FLT3LGP49771 235 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 HK3P52790 923 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 NPEPPSP55786 919 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 PER3P56645 1201 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 ZNF280AP59817 542 aaPredicted RBP8.08□□□□□ -1.12
PTPN12-202ENST00000407343 APBA1Q02410 837 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 ARHGAP29Q52LW3 1261 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 FAM47AQ5JRC9 791 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 PPP4R3AQ6IN85 833 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 NOL8Q76FK4 1167 aaKnown RBP8.08□□□□□ -1.12
PTPN12-202ENST00000407343 DRC7Q8IY82 874 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 FUKQ8N0W3 1084 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 PLBD2Q8NHP8 589 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 SLC35B2Q8TB61 432 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 RGMAQ96B86 450 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 TEPSINQ96N21 525 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 UHRF1Q96T88 793 aaPredicted RBP8.08□□□□□ -1.12
PTPN12-202ENST00000407343 CDC5LQ99459 802 aaKnown RBP8.08□□□□□ -1.12
PTPN12-202ENST00000407343 TCF25Q9BQ70 676 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 LSM14BQ9BX40 385 aaKnown RBP8.08□□□□□ -1.12
PTPN12-202ENST00000407343 ZCCHC4Q9H5U6 513 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 PRDM11Q9NQV5 511 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 SLC23A1Q9UHI7 598 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 SLC30A1Q9Y6M5 507 aa8.08□□□□□ -1.12
PTPN12-202ENST00000407343 NT5C1B-RDH14C9J2C7 533 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 PRC1O43663 620 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 PTPN7P35236 360 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 NOGQ13253 232 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 AFMIDQ63HM1 303 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 ANKS6Q68DC2 871 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 FAM111BQ6SJ93 734 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 GPRIN1Q7Z2K8 1008 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 COL23A1Q86Y22 540 aaPredicted RBP8.07□□□□□ -1.12
PTPN12-202ENST00000407343 TMX3Q96JJ7 454 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 KRTAP9-2Q9BYQ4 174 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 SENP6Q9GZR1 1112 aaPredicted RBP8.07□□□□□ -1.12
PTPN12-202ENST00000407343 CALCOCO1Q9P1Z2 691 aa8.07□□□□□ -1.12
PTPN12-202ENST00000407343 CXorf49A8MYA2 514 aaPredicted RBP8.06□□□□□ -1.12
PTPN12-202ENST00000407343 SLC16A6O15403 523 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 RAD17O75943 681 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 RPS19P39019 145 aaKnown RBP8.06□□□□□ -1.12
PTPN12-202ENST00000407343 AGFG1P52594 562 aaKnown RBP8.06□□□□□ -1.12
PTPN12-202ENST00000407343 CTXN1P60606 82 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 NKX6-1P78426 367 aaPredicted RBP8.06□□□□□ -1.12
PTPN12-202ENST00000407343 FOXL1Q12952 345 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 SNAPC2Q13487 334 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 RAB39AQ14964 217 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 KHDC1Q4VXA5 237 aaKnown RBP8.06□□□□□ -1.12
PTPN12-202ENST00000407343 OTUD7BQ6GQQ9 843 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 SWSAP1Q6NVH7 229 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 LIMS2Q7Z4I7 341 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 KIAA0319LQ8IZA0 1049 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 DNERQ8NFT8 737 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 ZNF512Q96ME7 567 aaPredicted RBP8.06□□□□□ -1.12
PTPN12-202ENST00000407343 VRK1Q99986 396 aaPredicted RBP8.06□□□□□ -1.12
PTPN12-202ENST00000407343 TMEM60Q9H2L4 133 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 PLA2G3Q9NZ20 509 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 NR2E3Q9Y5X4 410 aa8.06□□□□□ -1.12
PTPN12-202ENST00000407343 PNPLA7Q6ZV29 1317 aa8.05□□□□□ -1.12
PTPN12-202ENST00000407343 FTLP02792 175 aaPredicted RBP8.05□□□□□ -1.12
PTPN12-202ENST00000407343 IL2RBP14784 551 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms