RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TMEM143Q96AN5 459 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 KXD1Q9BQD3 176 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 HES2Q9Y543 173 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.41□□□□□ -0.9
SCFD1-202ENST00000396629 CCL16O15467 120 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 XYLBO75191 536 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 ECI2O75521 394 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 C8AP07357 584 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 NRLP54845 237 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 MTAPQ13126 283 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 ADCK5Q3MIX3 580 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 LIN9Q5TKA1 542 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 NOTUMQ6P988 496 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 ZNF852Q6ZMS4 543 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 FERMT3Q86UX7 667 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 IFNLR1Q8IU57 520 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-202ENST00000396629 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 RNF149Q8NC42 400 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 LNX1Q8TBB1 728 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-202ENST00000396629 TBCKQ8TEA7 893 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 TCP11Q8WWU5 503 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 PIK3R5Q8WYR1 880 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 MRPS17Q9Y2R5 130 aaKnown RBP9.41□□□□□ -0.9
SCFD1-202ENST00000396629 CHD6Q8TD26 2715 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 EML1O00423 815 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 DKC1O60832 514 aaKnown RBP eCLIP9.4□□□□□ -0.9
SCFD1-202ENST00000396629 TADA2AO75478 443 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 ERLIN2O94905 339 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 TDP2O95551 362 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 RETP07949 1114 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 QARSP47897 775 aaKnown RBP9.4□□□□□ -0.9
SCFD1-202ENST00000396629 PTENP60484 403 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 GRIK3Q13003 919 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 NTRK3Q16288 839 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 UVSSAQ2YD98 709 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 MOXD1Q6UVY6 613 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 RTL10Q7L3V2 364 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 CPB2Q96IY4 423 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 CEP170P1Q96L14 293 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 IER2Q9BTL4 223 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 CHRDQ9H2X0 955 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 ANO2Q9NQ90 1003 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 SH3GLB2Q9NR46 395 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 DNMT3BQ9UBC3 853 aaKnown RBP9.4□□□□□ -0.9
SCFD1-202ENST00000396629 RAB23Q9ULC3 237 aa9.4□□□□□ -0.9
SCFD1-202ENST00000396629 SF3B1O75533 1304 aaKnown RBP eCLIP9.4□□□□□ -0.913e-6■■■■■ 57.3
SCFD1-202ENST00000396629 POU5F1BQ06416 359 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 PPP2R5CQ13362 524 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 HSP90AA2PQ14568 343 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 PSMD5Q16401 504 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 AMHR2Q16671 573 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 RABGGTAQ92696 567 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 DNASE1L2Q92874 299 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 TTPALQ9BTX7 342 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 APOL6Q9BWW8 343 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 RNF26Q9BY78 433 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 NXF3Q9H4D5 531 aaKnown RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 AVENQ9NQS1 362 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 HCFC1R1Q9NWW0 138 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 WRAP73Q9P2S5 460 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 NAP1L2Q9ULW6 460 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 PDCD11Q14690 1871 aaKnown RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 TICRRQ7Z2Z1 1910 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 CHD8Q9HCK8 2581 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 ADAM12O43184 909 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 AKAP5P24588 427 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 AKAP17AQ02040 695 aaKnown RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 NCBP1Q09161 790 aaKnown RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 RAB33AQ14088 237 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 EMC2Q15006 297 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 CSRP2Q16527 193 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 AXDND1Q5T1B0 1012 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-202ENST00000396629 C4orf19Q8IY42 314 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 ELSPBP1Q96BH3 223 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 HEBP1Q9NRV9 189 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 SEMA4GQ9NTN9 838 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 GDE1Q9NZC3 331 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 VAV3Q9UKW4 847 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 POLIQ9UNA4 740 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 GREB1Q4ZG55 1949 aa9.39□□□□□ -0.91
SCFD1-202ENST00000396629 CFAP47Q6ZTR5 3102 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 M0R2N6 131 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 MAN2B1O00754 1011 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 ARF4P18085 180 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 MBTD1Q05BQ5 628 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 TUSC3Q13454 348 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 KRT32Q14532 448 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 MXD4Q14582 209 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-202ENST00000396629 PPP2R5DQ14738 602 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 LPAL2Q16609 132 aa9.38□□□□□ -0.91
SCFD1-202ENST00000396629 PABPC1LQ4VXU2 614 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms