RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PRUNE1Q86TP1 453 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 NLRP10Q86W26 655 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 SPATA4Q8NEY3 305 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 FAM213AQ9BRX8 229 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 ENO3P13929 434 aaPredicted RBP14.74□□□□□ -0.05
COL4A3-202ENST00000396578 SERPINB3P29508 390 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 MTHFD1LQ6UB35 978 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 FASTKD5Q7L8L6 764 aaKnown RBP14.74□□□□□ -0.05
COL4A3-202ENST00000396578 FAM167AQ96KS9 214 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 ZCCHC17Q9NP64 241 aaKnown RBP14.74□□□□□ -0.05
COL4A3-202ENST00000396578 SCN3BQ9NY72 215 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 ZNF197O14709 1029 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 EIF3HO15372 352 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL4A3-202ENST00000396578 SHROOM2Q13796 1616 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 ARHGAP31Q2M1Z3 1444 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 TEX2Q8IWB9 1127 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 CCT8L2Q96SF2 557 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 CXorf56Q9H5V9 222 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 VIPAS39Q9H9C1 493 aa14.74□□□□□ -0.05
COL4A3-202ENST00000396578 NUP153P49790 1475 aaKnown RBP14.74□□□□□ -0.05
COL4A3-202ENST00000396578 PKN3Q6P5Z2 889 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 CCDC103Q8IW40 242 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 C1orf54Q8WWF1 131 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 RFFLQ8WZ73 363 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 MYO1GB0I1T2 1018 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 NFIBO00712 420 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 PRKAB2O43741 272 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 GUCA1CO95843 209 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 EIF2AK2P19525 551 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 DHX40Q8IX18 779 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 AIFM3Q96NN9 605 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 THTPAQ9BU02 230 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 RANBP17Q9H2T7 1088 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 PPP1R37O75864 691 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 TOMM70O94826 608 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 CHN1P15882 459 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 FAM102AQ5T9C2 384 aaPredicted RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 DCAF4Q8WV16 495 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 H2AFY2Q9P0M6 372 aaPredicted RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 RNPC3Q96LT9 517 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 FBXO2Q9UK22 296 aaPredicted RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 POLIQ9UNA4 740 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 CDYLQ9Y232 598 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 GOLGA8RI6L899 631 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 KLHL2O95198 593 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 ATP1A1P05023 1023 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 CDK8P49336 464 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 SEMA3FQ13275 785 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 ORC2Q13416 577 aaPredicted RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 EFHBQ8N7U6 833 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 CCT7Q99832 543 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 TBX22Q9Y458 520 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 PZPP20742 1482 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 KCNN4O15554 427 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 KCNQ4P56696 695 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 TTC30AQ86WT1 665 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 SFR1Q86XK3 245 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 RBM46Q8TBY0 533 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 SH3TC2Q8TF17 1288 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 INPP5DQ92835 1189 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 TADA1Q96BN2 335 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 DHX35Q9H5Z1 703 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 ALG13Q9NP73 1137 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 EIF3EP60228 445 aaKnown RBP14.73□□□□□ -0.05
COL4A3-202ENST00000396578 TRPM8Q7Z2W7 1104 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 STAG2Q8N3U4 1231 aa14.73□□□□□ -0.05
COL4A3-202ENST00000396578 PLEKHA8P1O95397 391 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 SLC1A1P43005 524 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 CDH6P55285 790 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 DCAF4L1Q3SXM0 396 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 THNSL1Q8IYQ7 743 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 TSPAN17Q96FV3 270 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 AMACRQ9UHK6 382 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 TBL3Q12788 808 aaKnown RBP14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ANGPT1Q15389 498 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 DNAJC9Q8WXX5 260 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ADGRG1Q9Y653 693 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 LRRC74AQ0VAA2 488 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ATL2Q8NHH9 583 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 URGCPQ8TCY9 931 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 OSBP2Q969R2 916 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 FAM162AQ96A26 154 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 BRD8Q9H0E9 1235 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 GGT7Q9UJ14 662 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 SLC9A5Q14940 896 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.72□□□□□ -0.05
COL4A3-202ENST00000396578 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 CLCA2Q9UQC9 943 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 RASSF9O75901 435 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ARHGAP27Q6ZUM4 889 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 GALNT4Q8N4A0 578 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 RFWD2Q8NHY2 731 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 PLEKHA8Q96JA3 519 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ORAI2Q96SN7 254 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 RTN2O75298 545 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 MRPS35P82673 323 aaKnown RBP14.72□□□□□ -0.05
COL4A3-202ENST00000396578 PDAP1Q13442 181 aaKnown RBP14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ZNF746Q6NUN9 644 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms