RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 NME8Q8N427 588 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RNF149Q8NC42 400 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ETNPPLQ8TBG4 499 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GMLQ99445 158 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 NIF3L1Q9GZT8 377 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CFAP69A5D8W1 941 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PABPN1LA6NDY0 278 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GNA15P30679 374 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RAB27AP51159 221 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ERVK-9P63128 1117 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ERVK-24P63145 666 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 MDM2Q00987 491 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GIT2Q14161 759 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 LONRF2Q1L5Z9 754 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 C6orf163Q5TEZ5 329 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 E4F1Q66K89 784 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CATSPERGQ6ZRH7 1159 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TRIM50Q86XT4 487 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RHPN2Q8IUC4 686 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SLC35F6Q8N357 371 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HAS1Q92839 578 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TNFRSF25Q93038 417 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HPS3Q969F9 1004 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CHAMP1Q96JM3 812 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 MED15Q96RN5 788 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ASNSD1Q9NWL6 643 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PIKFYVEQ9Y2I7 2098 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TNRC6CQ9HCJ0 1690 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HOXA2O43364 376 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 PTGER2P43116 358 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 LRRC41Q15345 812 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 GNASQ5JWF2 1037 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 C9orf131Q5VYM1 1079 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 MAGOHBQ96A72 148 aaKnown RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 TMEM134Q9H6X4 195 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 AGO4Q9HCK5 861 aaKnown RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SUCLA2Q9P2R7 463 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 NRBP1Q9UHY1 535 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 HMGB1P1B2RPK0 211 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 STAMBPO95630 424 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 ICAM3P32942 547 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 PRMT2P55345 433 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 IGBP1P78318 339 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 MAP3K10Q02779 954 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 GRB10Q13322 594 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 MEA1Q16626 185 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 TMEM270Q6UE05 265 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 CPLX4Q7Z7G2 160 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 CFAP57Q96MR6 1250 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 OSBPL9Q96SU4 736 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SNX25Q9H3E2 840 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 FBXO28Q9NVF7 368 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SOWAHDA6NJG2 315 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SRGAP2BP0DMP2 458 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 GCLMP48507 274 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 ELAVL2Q12926 359 aaKnown RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 ARHGEF18Q6ZSZ5 1173 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 ERICH1Q86X53 443 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 MAP4K3Q8IVH8 894 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 TTC1Q99614 292 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 PLEKHA5Q9HAU0 1116 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 IP6K2Q9UHH9 426 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 DSEQ9UL01 958 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SPAG6O75602 509 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 MCL1Q07820 350 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 GOLGA8FQ08AF8 430 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 GOLGA8DPQ0D2H9 430 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 NCOA4Q13772 614 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 E2F5Q15329 346 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 C1orf186Q6ZWK4 172 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF384Q8TF68 577 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 IFT81Q8WYA0 676 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SETSIPP0DME0 302 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 MX2P20592 715 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SDC4P31431 198 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 LAMB3Q13751 1172 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 CFAP157Q5JU67 520 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 AFAP1L2Q8N4X5 818 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SPATA4Q8NEY3 305 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 PORCNQ9H237 461 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 MRFAP1Q9Y605 127 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 FAM169AQ9Y6X4 670 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 F9P00740 461 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 GNRH1P01148 92 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 EIF4BP23588 611 aaKnown RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 GHRHRQ02643 423 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 FAM47CQ5HY64 1035 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 TADA2BQ86TJ2 420 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 AGBL1Q96MI9 1066 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 NT5C1AQ9BXI3 368 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 POLR3FQ9H1D9 316 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 TMEM260Q9NX78 707 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 ANAPC7Q9UJX3 599 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF148Q9UQR1 794 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 SPTBN1Q01082 2364 aaKnown RBP3.61□□□□□ -1.83
VPS13C-203ENST00000395896 FAM187AA6NFU0 413 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 CLIC2O15247 247 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 NCAM2O15394 837 aa3.61□□□□□ -1.83
VPS13C-203ENST00000395896 CTIFO43310 598 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms