RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ARHGEF3Q9NR81 526 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 PCDHA12Q9UN75 941 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 NUMBLQ9Y6R0 609 aa23.44■■□□□ 1.34
TRAF4-203ENST00000394925 A0A087WWV3 80 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 ANHXE9PGG2 379 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 ZMYND10O75800 440 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 LYPLA2O95372 231 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 PHLDB3Q6NSJ2 640 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 PAAF1Q9BRP4 392 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 NFKBIZQ9BYH8 718 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 POLR3FQ9H1D9 316 aaPredicted RBP23.43■■□□□ 1.34
TRAF4-203ENST00000394925 SEMA4AQ9H3S1 761 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 SIT1Q9Y3P8 196 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 CACNA1AO00555 2505 aa23.43■■□□□ 1.34
TRAF4-203ENST00000394925 A0A1B0GUA9 196 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 FSHRP23945 695 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 RARRES1P49788 294 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 HSP90AA2PQ14568 343 aaPredicted RBP23.42■■□□□ 1.34
TRAF4-203ENST00000394925 CALCRLQ16602 461 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 RTP2Q5QGT7 225 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 DCLRE1AQ6PJP8 1040 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 GRASPQ7Z6J2 395 aaPredicted RBP23.42■■□□□ 1.34
TRAF4-203ENST00000394925 PIGOQ8TEQ8 1089 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 HASPINQ8TF76 798 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 TTC12Q9H892 705 aaPredicted RBP23.42■■□□□ 1.34
TRAF4-203ENST00000394925 ORC3Q9UBD5 711 aaPredicted RBP23.42■■□□□ 1.34
TRAF4-203ENST00000394925 TPCN1Q9ULQ1 816 aa23.42■■□□□ 1.34
TRAF4-203ENST00000394925 CACNA1IQ9P0X4 2223 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 SF3B1O75533 1304 aaKnown RBP eCLIP23.41■■□□□ 1.343e-6■■■■□ 20.7
TRAF4-203ENST00000394925 LRRIQ4A6NIV6 560 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 USO1O60763 962 aaKnown RBP23.41■■□□□ 1.34
TRAF4-203ENST00000394925 PFKFB2O60825 505 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 CTDNEP1O95476 244 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 KRT2P35908 639 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 MAEAQ7L5Y9 396 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 RPP25Q9BUL9 199 aaKnown RBP23.41■■□□□ 1.34
TRAF4-203ENST00000394925 SLC2A4RGQ9NR83 387 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 DLGAP2Q9P1A6 1054 aa23.41■■□□□ 1.34
TRAF4-203ENST00000394925 CASTOR2A6NHX0 329 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 NTHL1P78549 312 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 CEP57Q86XR8 500 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 WASF1Q92558 559 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 FOXQ1Q9C009 403 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 GPRC5CQ9NQ84 441 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 FBXW11Q9UKB1 542 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 ZFP37Q9Y6Q3 630 aaPredicted RBP23.4■■□□□ 1.34
TRAF4-203ENST00000394925 ZMYM2Q9UBW7 1377 aa23.4■■□□□ 1.34
TRAF4-203ENST00000394925 MYH15Q9Y2K3 1946 aa23.39■■□□□ 1.34
TRAF4-203ENST00000394925 TXKP42681 527 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 TUSC3Q13454 348 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 LIN9Q5TKA1 542 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 FAM171A1Q5VUB5 890 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 PARM1Q6UWI2 310 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 C1orf210Q8IVY1 113 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 FGF14Q92915 247 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 TNFRSF25Q93038 417 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 CLSTN3Q9BQT9 956 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 TTPALQ9BTX7 342 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 BRMS1Q9HCU9 246 aa23.39■■□□□ 1.33
TRAF4-203ENST00000394925 KIF4AO95239 1232 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 SP9P0CG40 484 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 GPC5P78333 572 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 PSMD5Q16401 504 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 PPM1LQ5SGD2 360 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 KIAA2013Q8IYS2 634 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 PJA1Q8NG27 643 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 LNX1Q8TBB1 728 aaPredicted RBP23.38■■□□□ 1.33
TRAF4-203ENST00000394925 PRMT7Q9NVM4 692 aaPredicted RBP23.38■■□□□ 1.33
TRAF4-203ENST00000394925 CDH7Q9ULB5 785 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 OTOGLQ3ZCN5 2332 aa23.38■■□□□ 1.33
TRAF4-203ENST00000394925 LRRN2O75325 713 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 C8AP07357 584 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 GLULP15104 373 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 ZC3H14Q6PJT7 736 aaKnown RBP23.37■■□□□ 1.33
TRAF4-203ENST00000394925 PPP4R3CPQ6ZMV5 832 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 PIK3R5Q8WYR1 880 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 PRIMPOLQ96LW4 560 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 HINFPQ9BQA5 517 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 SNTG2Q9NY99 539 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 POLIQ9UNA4 740 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 FANCMQ8IYD8 2048 aa23.37■■□□□ 1.33
TRAF4-203ENST00000394925 MIA3Q5JRA6 1907 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 POTEMA6NI47 508 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 TTLL13PA6NNM8 815 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 WNT7AO00755 349 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 PTGESO14684 152 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 CCL16O15467 120 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 NEMFO60524 1076 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 THP07101 528 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 HNRNPA1P09651 372 aaKnown RBP eCLIP23.36■■□□□ 1.33
TRAF4-203ENST00000394925 XRCC6P12956 609 aaKnown RBP eCLIP23.36■■□□□ 1.333e-10■■□□□ 12.6
TRAF4-203ENST00000394925 FDPSP14324 419 aaKnown RBP23.36■■□□□ 1.33
TRAF4-203ENST00000394925 STARD6P59095 220 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 SNW1Q13573 536 aaKnown RBP23.36■■□□□ 1.33
TRAF4-203ENST00000394925 TMEM132AQ24JP5 1023 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 ZBTB8OSQ8IWT0 167 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 RMDN1Q96DB5 314 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 SHDQ96IW2 340 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 CXCL16Q9H2A7 254 aa23.36■■□□□ 1.33
TRAF4-203ENST00000394925 FZD8Q9H461 694 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms