RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 WRAP73Q9P2S5 460 aaPredicted RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 UBIAD1Q9Y5Z9 338 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 UBE4BO95155 1302 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 MIF4GDA9UHW6 222 aaKnown RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 ZRANB2O95218 330 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDX2-201ENST00000381020 ACSL3O95573 720 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 KRT1P04264 644 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 RFX1P22670 979 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 CDO1Q16878 200 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 ZCWPW2Q504Y3 356 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 USP38Q8NB14 1042 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 TTC16Q8NEE8 873 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 SPATC1LQ9H0A9 340 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 STMN4Q9H169 189 aaPredicted RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 TAF1DQ9H5J8 278 aaPredicted RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 ZWILCHQ9H900 591 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 SYNPO2Q9UMS6 1093 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 SRCAPQ6ZRS2 3230 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 PI4K2BG5E9Z4 385 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 PIK3R2O00459 728 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 IRF6O14896 467 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 MUTP22033 750 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 CLCN3P51790 818 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 DUOXA2Q1HG44 320 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 OR2W6PQ8NHA6 318 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 MAIP1Q8WWC4 291 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 BTAF1O14981 1849 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 OPLAHO14841 1288 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 TMEM253P0C7T8 217 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 HNRNPH2P55795 449 aaKnown RBP13.38□□□□□ -0.27
CDX2-201ENST00000381020 SPIRE1Q08AE8 756 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 CREG2Q8IUH2 290 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 VPS33BQ9H267 617 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 GANQ9H2C0 597 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 GINM1Q9NU53 330 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 TBK1Q9UHD2 729 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 NOL4O94818 638 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 CCNE2O96020 404 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 FASTKD5Q7L8L6 764 aaKnown RBP13.38□□□□□ -0.27
CDX2-201ENST00000381020 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
CDX2-201ENST00000381020 RSAD2Q8WXG1 361 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 TTYH3Q9C0H2 523 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 SLC5A4Q9NY91 659 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 CYP39A1Q9NYL5 469 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 DBR1Q9UK59 544 aaKnown RBP13.38□□□□□ -0.27
CDX2-201ENST00000381020 SYNGAP1Q96PV0 1343 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 KRT15P19012 456 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 GPC3P51654 580 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
CDX2-201ENST00000381020 HADHQ16836 314 aaKnown RBP13.38□□□□□ -0.27
CDX2-201ENST00000381020 PHLDB3Q6NSJ2 640 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 CCDC137Q6PK04 289 aaKnown RBP13.38□□□□□ -0.27
CDX2-201ENST00000381020 TAS2R14Q9NYV8 317 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 PCSK1NQ9UHG2 260 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 SALL4Q9UJQ4 1053 aa13.38□□□□□ -0.27
CDX2-201ENST00000381020 CACNA1SQ13698 1873 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 H3BQF6 201 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 SGK1O00141 431 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ITGA4P13612 1032 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 NOP14P78316 857 aaKnown RBP13.37□□□□□ -0.27
CDX2-201ENST00000381020 OR6B2Q6IFH4 312 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 MMS22LQ6ZRQ5 1243 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 FAM149B1Q96BN6 582 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ADARB2Q9NS39 739 aaKnown RBP13.37□□□□□ -0.27
CDX2-201ENST00000381020 MAP3K20Q9NYL2 800 aaKnown RBP13.37□□□□□ -0.27
CDX2-201ENST00000381020 FBXL5Q9UKA1 691 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 TTC7AQ9ULT0 858 aaPredicted RBP13.37□□□□□ -0.27
CDX2-201ENST00000381020 ATRNL1Q5VV63 1379 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 GLI1P08151 1106 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ABCD1P33897 745 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 CUL1Q13616 776 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 HP1BP3Q5SSJ5 553 aaPredicted RBP13.37□□□□□ -0.27
CDX2-201ENST00000381020 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ALS2CLQ60I27 953 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ANO5Q75V66 913 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ERO1BQ86YB8 467 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 MMGT1Q8N4V1 131 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 FAM81BQ96LP2 452 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 GMLQ99445 158 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 HSD17B4P51659 736 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 SLC8A3P57103 927 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 EFCAB12Q6NXP0 572 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 RBBP8NLQ8NC74 664 aaPredicted RBP13.37□□□□□ -0.27
CDX2-201ENST00000381020 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
CDX2-201ENST00000381020 PFASO15067 1338 aa13.36□□□□□ -0.27
CDX2-201ENST00000381020 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
CDX2-201ENST00000381020 FANCGO15287 622 aa13.36□□□□□ -0.27
CDX2-201ENST00000381020 NR1D1P20393 614 aa13.36□□□□□ -0.27
CDX2-201ENST00000381020 ORC1Q13415 861 aa13.36□□□□□ -0.27
CDX2-201ENST00000381020 CCDC121Q6ZUS5 278 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms