RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 DNM3Q9UQ16 869 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 A6NJR5 290 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 COQ9O75208 318 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 NUDT17P0C025 328 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 SLC9A1P19634 815 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 NSMFQ6X4W1 530 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 RBM44Q6ZP01 1051 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 TMEM110Q86TL2 294 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 PYROXD1Q8WU10 500 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 SYN2Q92777 582 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 KLF6Q99612 283 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 EIF2AQ9BY44 585 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 GRIP2Q9C0E4 1043 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 PAIP1Q9H074 479 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 APPL1Q9UKG1 709 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 HARSP12081 509 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 RTP1P59025 263 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 YWHAGP61981 247 aaKnown RBP eCLIP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 AP1B1Q10567 949 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 RASGRF1Q13972 1273 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 INAQ16352 499 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 EARS2Q5JPH6 523 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 SLCO1B3Q9NPD5 702 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 MARCOQ9UEW3 520 aaPredicted RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 DOLKQ9UPQ8 538 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 NAALADL1Q9UQQ1 740 aa11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 TDRKHQ9Y2W6 561 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 MTO1Q9Y2Z2 717 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
SYNPO2L-201ENST00000372873 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ZSCAN9O15535 394 aaPredicted RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ITIH2P19823 946 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 TSPY1Q01534 308 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ATP1A4Q13733 1029 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 TBCKQ8TEA7 893 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 NAT14Q8WUY8 206 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 TLCD1Q96CP7 247 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 DGCR14Q96DF8 476 aaKnown RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ZNF333Q96JL9 665 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 RBM15Q96T37 977 aaKnown RBP eCLIP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 MRPL46Q9H2W6 279 aaKnown RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 SATB2Q9UPW6 733 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 NIP7Q9Y221 180 aaKnown RBP eCLIP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 MAPK4P31152 587 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 RPL21P46778 160 aaKnown RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ACAP1Q15027 740 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 MYCT1Q8N699 235 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 TUBA8Q9NY65 449 aaPredicted RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 WDR37Q9Y2I8 494 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 DTNAQ9Y4J8 743 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ALG6Q9Y672 507 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 NCAPD2Q15021 1401 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 TOM1L1O75674 476 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 GH1P01241 217 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 PYGMP11217 842 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 TUBP50607 506 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 CDK7P50613 346 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 IZUMO3Q5VZ72 239 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 CENPUQ71F23 418 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 PPM1KQ8N3J5 372 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 ZBTB8BQ8NAP8 495 aaPredicted RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 RBM17Q96I25 401 aaKnown RBP11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 OSGEPQ9NPF4 335 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 DNAJC12Q9UKB3 198 aa11.9□□□□□ -0.5
SYNPO2L-201ENST00000372873 A8MXQ7 604 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 G3V3G9 751 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 GOLGA8MH3BSY2 632 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 BFSP1Q12934 665 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 CTTNQ14247 550 aaKnown RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 PDIA6Q15084 440 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 BBS9Q3SYG4 887 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 EMC10Q5UCC4 262 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ATG16L1Q676U5 607 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 SPATA17Q96L03 361 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 LPXNO60711 386 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 FTLP02792 175 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 OCM2P0CE71 109 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 OCMP0CE72 109 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 EEF1B2P24534 225 aaKnown RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 CCR3P51677 355 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ITGA8P53708 1063 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 LMNB2Q03252 620 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ZNF746Q6NUN9 644 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 C4orf50Q6ZRC1 276 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ATG9AQ7Z3C6 839 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ZBED8Q8IZ13 594 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 TMCO5AQ8N6Q1 288 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms