RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 POTEFA5A3E0 1075 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 MYADML2A6NDP7 307 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 NKRFO15226 690 aaKnown RBP eCLIP12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 KCNA2P16389 499 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 GJA8P48165 433 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 GUCY2FP51841 1108 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 ARHGAP1Q07960 439 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 IFT88Q13099 833 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 KIAA0753Q2KHM9 967 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 GNASQ5JWF2 1037 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 TRIM59Q8IWR1 403 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 CACNA2D3Q8IZS8 1091 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 SYCE1Q8N0S2 351 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 RASGEF1CQ8N431 466 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 AFG1LQ8WV93 481 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 CCDC114Q96M63 670 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 SPATA33Q96N06 139 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 MBOAT7Q96N66 472 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 SENP7Q9BQF6 1050 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 RABEP2Q9H5N1 569 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 TTC7AQ9ULT0 858 aaPredicted RBP12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 TELO2Q9Y4R8 837 aa12.36□□□□□ -0.43
TSPAN1-201ENST00000372003 PGRMC1O00264 195 aaKnown RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 GFPT2O94808 682 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 GSTA1P08263 222 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 EN2P19622 333 aaPredicted RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 CTNNA1P35221 906 aaKnown RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 SEC24CP53992 1094 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 GJA9P57773 515 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 ZNF844Q08AG5 666 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 KLHL30Q0D2K2 578 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 CALCRLQ16602 461 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 EDRF1Q3B7T1 1238 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 HSDL1Q3SXM5 330 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 ANKRD20A8PQ5CZ79 823 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 HYIQ5T013 277 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 GKAP1Q5VSY0 366 aaPredicted RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 RNF180Q86T96 592 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 TATDN2Q93075 761 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 FBXL5Q9UKA1 691 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 OGDHLQ9ULD0 1010 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 Q9Y3F1 56 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 CEP83Q9Y592 693 aa12.35□□□□□ -0.43
TSPAN1-201ENST00000372003 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 ESYT3A0FGR9 886 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 CHMP2AO43633 222 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 GAS7O60861 476 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 FTCDO95954 541 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 PRKCIP41743 596 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 TXKP42681 527 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 SOX10P56693 466 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 POLR2FP61218 127 aaKnown RBP12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 MRPS25P82663 173 aaKnown RBP12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 LRRC41Q15345 812 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 FSCN1Q16658 493 aaKnown RBP12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 LRCH2Q5VUJ6 765 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 METTL7BQ6UX53 244 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 SLFN11Q7Z7L1 901 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 FUKQ8N0W3 1084 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 ARRDC4Q8NCT1 418 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 ETNPPLQ8TBG4 499 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 DDX12PQ92771 950 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 EEF2KMTQ96G04 330 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 SEC16BQ96JE7 1060 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 CRISPLD2Q9H0B8 497 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 NT5C3AQ9H0P0 336 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 GANQ9H2C0 597 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 JPH1Q9HDC5 661 aaPredicted RBP12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 TBC1D22BQ9NU19 505 aa12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 SUCLA2Q9P2R7 463 aaPredicted RBP12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.34□□□□□ -0.43
TSPAN1-201ENST00000372003 A0A087X0T9 212 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 ZSCAN5CA6NGD5 496 aaPredicted RBP12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 DHX15O43143 795 aaKnown RBP12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 MYL3P08590 195 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 FAM228BP0C875 321 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 EZRP15311 586 aaKnown RBP12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 ELF1P32519 619 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 CPT1AP50416 773 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 COASYQ13057 564 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 KCNA10Q16322 511 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 BRDTQ58F21 947 aaPredicted RBP12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 CYB5D1Q6P9G0 228 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 HOOK3Q86VS8 718 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 LRRC57Q8N9N7 239 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 HAS1Q92839 578 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms