RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 SNF8Q96H20 258 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 CNDP1Q96KN2 507 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 GINS4Q9BRT9 223 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ZWILCHQ9H900 591 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ZNF277Q9NRM2 450 aaPredicted RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 NSMCE4AQ9NXX6 385 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ABCC12Q96J65 1359 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SALL3Q9BXA9 1300 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 KLRF2D3W0D1 207 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SNPHO15079 494 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 PEX5P50542 639 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ST3GAL1Q11201 340 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ACAP1Q15027 740 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 HIF1AQ16665 826 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 LVRNQ6Q4G3 990 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 TSHZ1Q6ZSZ6 1077 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 RIN3Q8TB24 985 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 PPP2R3CQ969Q6 453 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 OSBPL8Q9BZF1 889 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 FAM192AQ9GZU8 254 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 CEP72Q9P209 647 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 IPO11Q9UI26 975 aaKnown RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 STK24Q9Y6E0 443 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SOS2Q07890 1332 aaPredicted RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SYNDIG1LA6NDD5 238 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 TBC1D4O60343 1298 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ALBP02768 609 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 ELF3P78545 371 aaPredicted RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 WLSQ5T9L3 541 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 NEK10Q6ZWH5 1172 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SLC25A41Q8N5S1 370 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 SDR42E1Q8WUS8 393 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 CSRNP1Q96S65 589 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 DDX50Q9BQ39 737 aaKnown RBP9.04□□□□□ -0.96
LCA5-201ENST00000369846 LZTS2Q9BRK4 669 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 STK39Q9UEW8 545 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 TAF6LQ9Y6J9 622 aa9.04□□□□□ -0.96
LCA5-201ENST00000369846 DLG5Q8TDM6 1919 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 S100A1P23297 94 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 MXI1P50539 228 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 LRRC63Q05C16 580 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 KCNMA1Q12791 1236 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 IFRD2Q12894 506 aaPredicted RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 CBX3Q13185 183 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 CDC37Q16543 378 aaPredicted RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 NCAPG2Q86XI2 1143 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 CPXCR1Q8N123 301 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 NLRP3Q96P20 1036 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 RBM15Q96T37 977 aaKnown RBP eCLIP9.03□□□□□ -0.96
LCA5-201ENST00000369846 ASPSCR1Q9BZE9 553 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 FHDC1Q9C0D6 1143 aaPredicted RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 ATP8A2Q9NTI2 1148 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ZNF446Q9NWS9 450 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 DCDC2Q9UHG0 476 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 DDX25Q9UHL0 483 aaKnown RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 CARD8Q9Y2G2 431 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 PCDHGA3Q9Y5H0 932 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 CHD1O14646 1710 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ACEP12821 1306 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 TULP2O00295 520 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 OPLAHO14841 1288 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 PFDN6O15212 129 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ITGA6P23229 1130 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 RGS2P41220 211 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ANGPT1Q15389 498 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ZYXQ15942 572 aaKnown RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 C1orf228Q6PIY5 440 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 SCUBE1Q8IWY4 988 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 KCNB2Q92953 911 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ATXN7L3BQ96GX2 97 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 NARS2Q96I59 477 aaKnown RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 ATXN10Q9UBB4 475 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 CORO1CQ9ULV4 474 aaPredicted RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 PHTF1Q9UMS5 762 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 SH3GLB1Q9Y371 365 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 PGM3O95394 542 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 TAC1P20366 129 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 SCNN1BP51168 640 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 GPC5P78333 572 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 PERM1Q5SV97 790 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ARMC4Q5T2S8 1044 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 GLYCTKQ8IVS8 523 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 MMGT1Q8N4V1 131 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
LCA5-201ENST00000369846 DEPTORQ8TB45 409 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 ARHGEF1Q92888 912 aaKnown RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 QKIQ96PU8 341 aaKnown RBP eCLIP9.03□□□□□ -0.96
LCA5-201ENST00000369846 RNF26Q9BY78 433 aaPredicted RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 GRIP2Q9C0E4 1043 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 OLA1Q9NTK5 396 aaKnown RBP9.03□□□□□ -0.96
LCA5-201ENST00000369846 DOLKQ9UPQ8 538 aa9.03□□□□□ -0.96
LCA5-201ENST00000369846 NIP7Q9Y221 180 aaKnown RBP eCLIP9.03□□□□□ -0.96
LCA5-201ENST00000369846 KLHL2O95198 593 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms