RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ARHGAP6O43182 974 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 ZNF623O75123 536 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 RNF8O76064 485 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 SELPP16109 830 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 SFPQP23246 707 aaKnown RBP eCLIP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 MCM3P25205 808 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 CALML3P27482 149 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 CDC25AP30304 524 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 CHMP4BP1P59074 171 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 DSC1Q08554 894 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TBX2Q13207 712 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 ARTNQ5T4W7 220 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 SLC30A9Q6PML9 568 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 CYFIP1Q7L576 1253 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 ARHGAP22Q7Z5H3 698 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 VN1R2Q8NFZ6 395 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 NEK9Q8TD19 979 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 CCHCR1Q8TD31 782 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 RASGRP4Q8TDF6 673 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TBCKQ8TEA7 893 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 ZBTB10Q96DT7 871 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TUT1Q9H6E5 874 aaKnown RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 HOMER2Q9NSB8 354 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 BLOC1S4Q9NUP1 217 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 SLC9A2Q9UBY0 812 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TRPC6Q9Y210 931 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 MTCH2Q9Y6C9 303 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 C10orf142B7Z368 130 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 AGPSO00116 658 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 MYL1P05976 194 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 GPC3P51654 580 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 FPGSQ05932 587 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 ZBTB6Q15916 424 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 PABPC1LQ4VXU2 614 aaKnown RBP7.46□□□□□ -1.21
CSDE1-204ENST00000369530 ANO1Q5XXA6 986 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 CHRDL2Q6WN34 429 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 EPM2AIP1Q7L775 607 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-204ENST00000369530 TRIM50Q86XT4 487 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 FUKQ8N0W3 1084 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 SPATA20Q8TB22 786 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 SPDL1Q96EA4 605 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 RSRC1Q96IZ7 334 aaKnown RBP7.46□□□□□ -1.21
CSDE1-204ENST00000369530 CDHR1Q96JP9 859 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 EPC1Q9H2F5 836 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 HPSEQ9Y251 543 aa7.46□□□□□ -1.21
CSDE1-204ENST00000369530 TLL1O43897 1013 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 DNAJC8O75937 253 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 DEFB103AP81534 67 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 SSRP1Q08945 709 aaKnown RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 SNX1Q13596 522 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 ARHGEF16Q5VV41 709 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 CAPRIN2Q6IMN6 1127 aaKnown RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 CYB5D1Q6P9G0 228 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 LRRC8DQ7L1W4 858 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 CCDC13Q8IYE1 715 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 GPR65Q8IYL9 337 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 USP38Q8NB14 1042 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 B4GALNT2Q8NHY0 566 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 CCDC97Q96F63 343 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 RBM41Q96IZ5 413 aaKnown RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 CXCL16Q9H2A7 254 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 FZD8Q9H461 694 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 STARD7Q9NQZ5 370 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 CDC23Q9UJX2 597 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 IVNS1ABPQ9Y6Y0 642 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 ENPP3O14638 875 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 ECEL1O95672 775 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 MARCKSP29966 332 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 PAPOLAP51003 745 aaKnown RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 PDE4DQ08499 809 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 GRIK4Q16099 956 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF484Q5JVG2 852 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 C1orf186Q6ZWK4 172 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 SMG8Q8ND04 991 aaKnown RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 MIPOL1Q8TD10 442 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 SEPT1Q8WYJ6 367 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 APBB2Q92870 758 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 GJA10Q969M2 543 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 PGBD1Q96JS3 809 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 KATNAL1Q9BW62 490 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 S1PR5Q9H228 398 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 MINDY3Q9H8M7 445 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 ANO10Q9NW15 660 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 FBXO2Q9UK22 296 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF510Q9Y2H8 683 aa7.46□□□□□ -1.22
CSDE1-204ENST00000369530 TTLL13PA6NNM8 815 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 BECN2A8MW95 431 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 KBTBD13C9JR72 458 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 IPO5O00410 1097 aaKnown RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 DYNC1LI2O43237 492 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 MED24O75448 989 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 CAPN15O75808 1086 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 GJB5O95377 273 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 RPLP2P05387 115 aaKnown RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 LINGO3P0C6S8 592 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 GHRP10912 638 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 RPL13P26373 211 aaKnown RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 NAP1L1P55209 391 aaKnown RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 MDM2Q00987 491 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 MBTD1Q05BQ5 628 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms