RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DDX42Q86XP3 938 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 VSTM4Q8IW00 320 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 TERB1Q8NA31 727 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 DACH2Q96NX9 599 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 THAP9Q9H5L6 903 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 TBK1Q9UHD2 729 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 GHRP10912 638 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 POLR2EP19388 210 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 SLCO1A2P46721 670 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 TMED2Q15363 201 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 TCP11X2Q5H9J9 407 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 PASD1Q8IV76 773 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 NDST4Q9H3R1 872 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 WARS2Q9UGM6 360 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 NFU1Q9UMS0 254 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 PCDHA13Q9Y5I0 950 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 TMEM191CA6NGB0 347 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 STXBP2Q15833 593 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 CDR2LQ86X02 465 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 CDHR2Q9BYE9 1310 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 PRPSAP2O60256 369 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 RFC5P40937 340 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 MAGOHP61326 146 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 OLR1P78380 273 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 SLC7A5Q01650 507 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 RC3H1Q5TC82 1133 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 CCSAPQ6IQ19 270 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 IRGCQ6NXR0 463 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 CAPSLQ8WWF8 208 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 FUT8Q9BYC5 575 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 SLC12A6Q9UHW9 1150 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 MROH7-TTC4A0A0A0MT08 1334 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 HMOX2P30519 316 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 IQCF2Q8IXL9 164 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 BBS5Q8N3I7 341 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 FAM161BQ96MY7 647 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SLC16A4O15374 487 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 NBNO60934 754 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 ATP9AO75110 1047 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 TUFMP49411 452 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 RWDD4Q6NW29 188 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 RNF139Q8WU17 664 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 GRAMD1AQ96CP6 724 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 PANX2Q96RD6 677 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 NDNQ99608 321 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SLC39A3Q9BRY0 314 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 UTYO14607 1347 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 ZNF233A6NK53 670 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 XPO1O14980 1071 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SERPING1P05155 500 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SRGAP2BP0DMP2 458 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 DEFA1P59665 94 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 DEFA3P59666 94 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 STX1BP61266 288 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 ATP1A4Q13733 1029 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 KRT31Q15323 416 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 PFKFB3Q16875 520 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 P3H1Q32P28 736 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 RARS2Q5T160 578 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 STX12Q86Y82 276 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 STAG2Q8N3U4 1231 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 GALNT6Q8NCL4 622 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 FEM1BQ9UK73 627 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 ARL2BPQ9Y2Y0 163 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 FLT3P36888 993 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 VPS37AQ8NEZ2 397 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 PPWD1Q96BP3 646 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 OSBPL5Q9H0X9 879 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SLITRK6Q9H5Y7 841 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 PTCH1Q13635 1447 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 ZNF839A8K0R7 811 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 H3BQF6 201 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 HAUS5O94927 633 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 CDC27P30260 824 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 PRELPP51888 382 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 GRIN1Q05586 938 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SCRN3Q0VDG4 424 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 TMEM63BQ5T3F8 832 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 ADCK1Q86TW2 530 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 ATP6V1E2Q96A05 226 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 RNF146Q9NTX7 359 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
SMARCE1-202ENST00000348513 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 POTECB2RU33 542 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 COPS2P61201 443 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 NFIXQ14938 502 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 C10orf76Q5T2E6 689 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 TMTC4Q5T4D3 741 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 TOGARAM2Q6ZUX3 1019 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 CCDC103Q8IW40 242 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms