RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TNS2Q63HR2 1409 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 DLEC1Q9Y238 1755 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 RSPH10B2B2RC85 870 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 RSPH10BP0C881 870 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 OVGP1Q12889 678 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 TGFBRAP1Q8WUH2 860 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 FAM118BQ9BPY3 351 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 CCDC77Q9BR77 488 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 DMAP1Q9NPF5 467 aaPredicted RBP16.37■□□□□ 0.21
LMNA-201ENST00000347559 ANAPC5Q9UJX4 755 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
LMNA-201ENST00000347559 TRIM49P0CI25 452 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 TRIM49CP0CI26 452 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 KRT15P19012 456 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
LMNA-201ENST00000347559 HOXA7P31268 230 aaPredicted RBP16.36■□□□□ 0.21
LMNA-201ENST00000347559 PSMC6P62333 389 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 MOGSQ13724 837 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 NSMFQ6X4W1 530 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 MAPKAPK5Q8IW41 473 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 RHOT2Q8IXI1 618 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 STK33Q9BYT3 514 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
LMNA-201ENST00000347559 METTL14Q9HCE5 456 aaKnown RBP16.36■□□□□ 0.21
LMNA-201ENST00000347559 NEK3P51956 506 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 SLC34A1Q06495 639 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 CNPY1Q3B7I2 92 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 REEP2Q9BRK0 252 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 TRAF3IP3Q9Y228 551 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 WASF2Q9Y6W5 498 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 GYG2O15488 501 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 MED24O75448 989 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 CA4P22748 312 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 ORC2Q13416 577 aaPredicted RBP16.36■□□□□ 0.21
LMNA-201ENST00000347559 SPARCL1Q14515 664 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 TMEM63BQ5T3F8 832 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 ZC3H3Q8IXZ2 948 aaKnown RBP16.36■□□□□ 0.21
LMNA-201ENST00000347559 RDH13Q8NBN7 331 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 PREBQ9HCU5 417 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 KDM3AQ9Y4C1 1321 aa16.36■□□□□ 0.21
LMNA-201ENST00000347559 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 FOXN3O00409 490 aaPredicted RBP16.35■□□□□ 0.21
LMNA-201ENST00000347559 TP73O15350 636 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
LMNA-201ENST00000347559 KBTBD2Q8IY47 623 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 FAM186BQ8IYM0 893 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 TIPINQ9BVW5 301 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 VCX3BQ9H321 246 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 VCX3AQ9NNX9 186 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 CHST7Q9NS84 486 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 EXOC3O60645 756 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 PSMG1O95456 288 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 ASMTLO95671 621 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 OCRLQ01968 901 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 PDCD7Q8N8D1 485 aaKnown RBP16.35■□□□□ 0.21
LMNA-201ENST00000347559 WDR60Q8WVS4 1066 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 C10orf82Q8WW14 230 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 PTPRN2Q92932 1015 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 SNF8Q96H20 258 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 EYA3Q99504 573 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 GRID1Q9ULK0 1009 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
LMNA-201ENST00000347559 A0A0G2JND7 137 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 EDF1O60869 148 aaKnown RBP16.34■□□□□ 0.21
LMNA-201ENST00000347559 ATF2P15336 505 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 ZNF568Q3ZCX4 644 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 GATA6Q92908 595 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 GALNT8Q9NY28 637 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 PDP2Q9P2J9 529 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 NUMBLQ9Y6R0 609 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 PDXKO00764 312 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 RPA3P35244 121 aaPredicted RBP16.34■□□□□ 0.21
LMNA-201ENST00000347559 THOC5Q13769 683 aaKnown RBP16.34■□□□□ 0.21
LMNA-201ENST00000347559 CLNKQ7Z7G1 428 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 ATL2Q8NHH9 583 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 DTNBP1Q96EV8 351 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 AGPAT1Q99943 283 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 WHRNQ9P202 907 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.34■□□□□ 0.21
LMNA-201ENST00000347559 ARAP2Q8WZ64 1704 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 EXOC1LA0A1B0GW35 172 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 GGPS1O95749 300 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
LMNA-201ENST00000347559 LYNP07948 512 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 ITIH2P19823 946 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 CYP2J2P51589 502 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 ZBTB16Q05516 673 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 CBWD6Q4V339 395 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 CBWD3Q5JTY5 395 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 CBWD5Q5RIA9 395 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 OTOAQ7RTW8 1153 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 RUSC1Q9BVN2 902 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 TRABDQ9H4I3 376 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 TYW1Q9NV66 732 aaKnown RBP16.34■□□□□ 0.21
LMNA-201ENST00000347559 ARL8BQ9NVJ2 186 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms