RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 AP1G2O75843 785 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 GGPS1O95749 300 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 SETSIPP0DME0 302 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 ID4P47928 161 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 MRPS9P82933 396 aaKnown RBP8.02□□□□□ -1.13
ZNF540-202ENST00000343599 ARHGAP4P98171 946 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 PSMD2Q13200 908 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 CDCA2Q69YH5 1023 aaPredicted RBP8.02□□□□□ -1.13
ZNF540-202ENST00000343599 SUMF1Q8NBK3 374 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 NRBP2Q9NSY0 501 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 CHCHD3Q9NX63 227 aaKnown RBP8.02□□□□□ -1.13
ZNF540-202ENST00000343599 COL20A1Q9P218 1284 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 SLC9A2Q9UBY0 812 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 A0A1B0GUA9 196 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 SOD2P04179 222 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 PSAPP07602 524 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 IMPDH2P12268 514 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 GSPT1P15170 499 aaKnown RBP8.02□□□□□ -1.13
ZNF540-202ENST00000343599 SDSP20132 328 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 TMOD1P28289 359 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 LIG3P49916 1009 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 TYRO3Q06418 890 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 PPFIA1Q13136 1202 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 CSRP2Q16527 193 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 TPGS2Q68CL5 300 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 OTOP2Q7RTS6 562 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 ALYREFQ86V81 257 aaKnown RBP8.02□□□□□ -1.13
ZNF540-202ENST00000343599 PPP1R13BQ96KQ4 1090 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 ZMYND12Q9H0C1 365 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 KIF9Q9HAQ2 790 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 HOMER3Q9NSC5 361 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 DNAI1Q9UI46 699 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 TUBE1Q9UJT0 475 aa8.02□□□□□ -1.13
ZNF540-202ENST00000343599 CCDC194A0A1B0GVG4 234 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CCDC151A5D8V7 595 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CREB3O43889 395 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 EIF4BP23588 611 aaKnown RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 ERCC5P28715 1186 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 RDXP35241 583 aaKnown RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CLCN4P51793 760 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PPP2R5CQ13362 524 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 BRD3Q15059 726 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 LONRF2Q1L5Z9 754 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 WDR78Q5VTH9 848 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 RSRC2Q7L4I2 434 aaKnown RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 NCOA7Q8NI08 942 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 GDPD5Q8WTR4 605 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 MAP4K1Q92918 833 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 FAM20AQ96MK3 541 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 FAM161BQ96MY7 647 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 ANKEF1Q9NU02 776 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 SFPQP23246 707 aaKnown RBP eCLIP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 FNTAP49354 379 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 SLC8A3P57103 927 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PTPAQ15257 358 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 SF3A1Q15459 793 aaKnown RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 ATAT1Q5SQI0 421 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 TLDC1Q6P9B6 456 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 RBM43Q6ZSC3 357 aaKnown RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CCDC148Q8NFR7 591 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 BEST2Q8NFU1 509 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PIK3R5Q8WYR1 880 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 SLX1AQ9BQ83 275 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 JPH1Q9HDC5 661 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CD320Q9NPF0 282 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 TRMT1Q9NXH9 659 aaKnown RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 ZNF232Q9UNY5 417 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 NEUROG3Q9Y4Z2 214 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PCDHGB2Q9Y5G2 931 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PCDHA1Q9Y5I3 950 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CDY2AQ9Y6F7 541 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CCDC69A6NI79 296 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 CAVIN2O95810 425 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 RETP07949 1114 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 NDUFV1P49821 464 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PDE6CP51160 858 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PSMC6P62333 389 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 EGFLAMQ63HQ2 1017 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 E4F1Q66K89 784 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-202ENST00000343599 PPP4R3AQ6IN85 833 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 ARMCX6Q7L4S7 300 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 FAM71BQ8TC56 605 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 IGDCC4Q8TDY8 1250 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 RUBCNQ92622 972 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 C17orf75Q9HAS0 396 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 TBC1D7Q9P0N9 293 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 DERAQ9Y315 318 aa8.01□□□□□ -1.13
ZNF540-202ENST00000343599 ZBBXA8MT70 800 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 MAFO75444 373 aaPredicted RBP8□□□□□ -1.13
ZNF540-202ENST00000343599 ARHGEF15O94989 841 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 CYP3A5P20815 502 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 RABGGTBP53611 331 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 CATIPQ7Z7H3 387 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 RBM12BQ8IXT5 1001 aaKnown RBP8□□□□□ -1.13
ZNF540-202ENST00000343599 URGCPQ8TCY9 931 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 RABGGTAQ92696 567 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 C17orf80Q9BSJ5 609 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 MLXIPQ9HAP2 919 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 PDE11AQ9HCR9 933 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 FAM169AQ9Y6X4 670 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms