RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TFAP4Q01664 338 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 METTL7BQ6UX53 244 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 TRIM22Q8IYM9 498 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 HELQQ8TDG4 1101 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 FCRL3Q96P31 734 aaPredicted RBP12.9□□□□□ -0.34
ATXN3-201ENST00000340660 PDCD2LQ9BRP1 358 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 SEMA4CQ9C0C4 833 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 DYRK1BQ9Y463 629 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 TEX28O15482 410 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
ATXN3-201ENST00000340660 SLC28A2O43868 658 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 NMT2O60551 498 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 GSK3AP49840 483 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 IRX4P78413 519 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 CYP4F3Q08477 520 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 SEMA3BQ13214 749 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 OS9Q13438 667 aaPredicted RBP12.89□□□□□ -0.35
ATXN3-201ENST00000340660 FAM43BQ6ZT52 329 aaPredicted RBP12.89□□□□□ -0.35
ATXN3-201ENST00000340660 GRASPQ7Z6J2 395 aaPredicted RBP12.89□□□□□ -0.35
ATXN3-201ENST00000340660 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 SVOPQ8N4V2 548 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 ITFG1Q8TB96 612 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 ADAMTS14Q8WXS8 1223 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 MAF1Q9H063 256 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 IL17RBQ9NRM6 502 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 TCP11L1Q9NUJ3 509 aa12.89□□□□□ -0.35
ATXN3-201ENST00000340660 LRRK2Q5S007 2527 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 GSG1L2A8MUP6 293 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 AKAP3O75969 853 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 IL2RAP01589 272 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 DBN1Q16643 649 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 TSGA10IPQ3SY00 556 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 ELMSAN1Q6PJG2 1045 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 VSIG10LQ86VR7 867 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 ZNF280BQ86YH2 543 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 DPP7Q9UHL4 492 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 GINS2Q9Y248 185 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 WDR81Q562E7 1941 aa12.88□□□□□ -0.35
ATXN3-201ENST00000340660 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 UPK3BL1B0FP48 263 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 UPK3BL2E5RIL1 263 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 ECI2O75521 394 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 GALTP07902 379 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
ATXN3-201ENST00000340660 POU3F2P20265 443 aaPredicted RBP12.87□□□□□ -0.35
ATXN3-201ENST00000340660 SP4Q02446 784 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 KCNMA1Q12791 1236 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 FAM228AQ86W67 206 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 RNF169Q8NCN4 708 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
ATXN3-201ENST00000340660 PUS7LQ9H0K6 701 aaKnown RBP12.87□□□□□ -0.35
ATXN3-201ENST00000340660 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 MRPL17Q9NRX2 175 aaKnown RBP12.87□□□□□ -0.35
ATXN3-201ENST00000340660 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 PAXBP1Q9Y5B6 917 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 HRH3Q9Y5N1 445 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 TSC2P49815 1807 aa12.87□□□□□ -0.35
ATXN3-201ENST00000340660 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 EXTL3O43909 919 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 GNAI3P08754 354 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 C4orf17Q53FE4 359 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 CLUAP1Q96AJ1 413 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 MRPL9Q9BYD2 267 aaKnown RBP12.86□□□□□ -0.35
ATXN3-201ENST00000340660 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 PCDHA2Q9Y5H9 948 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 EML5Q05BV3 1969 aa12.86□□□□□ -0.35
ATXN3-201ENST00000340660 UTP20O75691 2785 aaKnown RBP12.86□□□□□ -0.35
ATXN3-201ENST00000340660 CCDC163A0A0D9SF12 145 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 TEX51A0A1B0GUA7 166 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 DCLK1O15075 740 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 GPR182O15218 404 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 B4GALT3O60512 393 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 INSRRP14616 1297 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 CCNE1P24864 410 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 MAPK8P45983 427 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 AK2P54819 239 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 SRSF11Q05519 484 aaKnown RBP12.85□□□□□ -0.35
ATXN3-201ENST00000340660 VAC14Q08AM6 782 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 GRM2Q14416 872 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 PGM5Q15124 567 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 RIPOR1Q6ZS17 1223 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 FMNL3Q8IVF7 1028 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 TRAPPC12Q8WVT3 735 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 RPS6KC1Q96S38 1066 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 PLEKHA4Q9H4M7 779 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 NRDE2Q9H7Z3 1164 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 EPB41L4AQ9HCS5 686 aaPredicted RBP12.85□□□□□ -0.35
ATXN3-201ENST00000340660 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 ABCB11O95342 1321 aa12.85□□□□□ -0.35
ATXN3-201ENST00000340660 DNHD1Q96M86 4753 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms