RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 RBAKQ9NYW8 714 aaPredicted RBP19.95■□□□□ 0.78
USP39-201ENST00000323701 AKT3Q9Y243 479 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 CNTNAP2Q9UHC6 1331 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 TOMM70O94826 608 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 F2P00734 622 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 SOX5P35711 763 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 PRKCIP41743 596 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 LACTBP83111 547 aaPredicted RBP19.95■□□□□ 0.78
USP39-201ENST00000323701 TRIM32Q13049 653 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 KIAA0753Q2KHM9 967 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 KIAA0319LQ8IZA0 1049 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 TRIB2Q92519 343 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 KREMEN1Q96MU8 473 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 TCHPQ9BT92 498 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.95■□□□□ 0.78
USP39-201ENST00000323701 L2HGDHQ9H9P8 463 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 KAT6AQ92794 2004 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 COL1A2P08123 1366 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 MAGEB2O15479 319 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 IPO7O95373 1038 aaKnown RBP19.94■□□□□ 0.78
USP39-201ENST00000323701 CASQ1P31415 396 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 SLC18A3Q16572 532 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 CEP120Q8N960 986 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 PACSIN1Q9BY11 444 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 KIAA1586Q9HCI6 787 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 FAM170AA1A519 330 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 MACROD2A1Z1Q3 448 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 MYADML2A6NDP7 307 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 ACKR2O00590 384 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 PROZP22891 400 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 MAGEA1P43355 309 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 FLT3LGP49771 235 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 TFDP1Q14186 410 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 NAA30Q147X3 362 aaPredicted RBP19.94■□□□□ 0.78
USP39-201ENST00000323701 AMHR2Q16671 573 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 TDRD10Q5VZ19 366 aaKnown RBP19.94■□□□□ 0.78
USP39-201ENST00000323701 ZNF662Q6ZS27 426 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 FBXL13Q8NEE6 735 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 TATDN2Q93075 761 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 C2orf40Q9H1Z8 148 aa19.94■□□□□ 0.78
USP39-201ENST00000323701 URI1O94763 535 aaPredicted RBP19.93■□□□□ 0.78
USP39-201ENST00000323701 TFRCP02786 760 aaKnown RBP19.93■□□□□ 0.78
USP39-201ENST00000323701 SMIM10L2AP0DMW4 78 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 SMIM10L2BP0DMW5 78 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 STAT1P42224 750 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 GPC3P51654 580 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 TMEM62Q0P6H9 643 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 CETN1Q12798 172 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 TSHZ1Q6ZSZ6 1077 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 OR5B17Q8NGF7 314 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 HELQQ8TDG4 1101 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 ACP6Q9NPH0 428 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 RAB20Q9NX57 234 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 ASAP2O43150 1006 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 VNN1O95497 513 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 C4BPAP04003 597 aaKnown RBP19.93■□□□□ 0.78
USP39-201ENST00000323701 TNNI1P19237 187 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 PRKCZQ05513 592 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 MCL1Q07820 350 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 PRPF4BQ13523 1007 aaKnown RBP19.93■□□□□ 0.78
USP39-201ENST00000323701 IRF5Q13568 498 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 ATF7IP2Q5U623 682 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 TMEM192Q8IY95 271 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 CAPNS2Q96L46 248 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 SYT11Q9BT88 431 aa19.93■□□□□ 0.78
USP39-201ENST00000323701 GTF2H1P32780 548 aa19.92■□□□□ 0.78
USP39-201ENST00000323701 GTF2F1P35269 517 aaKnown RBP eCLIP19.92■□□□□ 0.78
USP39-201ENST00000323701 OSTNP61366 133 aa19.92■□□□□ 0.78
USP39-201ENST00000323701 ZNF200P98182 395 aaPredicted RBP19.92■□□□□ 0.78
USP39-201ENST00000323701 PPM1KQ8N3J5 372 aa19.92■□□□□ 0.78
USP39-201ENST00000323701 FNBP1Q96RU3 617 aa19.92■□□□□ 0.78
USP39-201ENST00000323701 NFKBIZQ9BYH8 718 aa19.92■□□□□ 0.78
USP39-201ENST00000323701 DDX3XO00571 662 aaKnown RBP eCLIP19.91■□□□□ 0.789e-13■■■■□ 21.9
USP39-201ENST00000323701 KIAA0391O15091 583 aaKnown RBP19.91■□□□□ 0.78
USP39-201ENST00000323701 KRT86O43790 486 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 FCGRTP55899 365 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 KIF5AQ12840 1032 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 NOGQ13253 232 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 ZACNQ401N2 412 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 NFRKBQ6P4R8 1299 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 RUFY4Q6ZNE9 571 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 PALB2Q86YC2 1186 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 TMEM130Q8N3G9 435 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 LNX1Q8TBB1 728 aaPredicted RBP19.91■□□□□ 0.78
USP39-201ENST00000323701 CPB2Q96IY4 423 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 FAM49AQ9H0Q0 323 aaPredicted RBP19.91■□□□□ 0.78
USP39-201ENST00000323701 NENFQ9UMX5 172 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 CAPN6Q9Y6Q1 641 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 TRIP12Q14669 1992 aaPredicted RBP19.91■□□□□ 0.78
USP39-201ENST00000323701 LDHAP00338 332 aaKnown RBP19.91■□□□□ 0.78
USP39-201ENST00000323701 MYL3P08590 195 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 FGFR4P22455 802 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 MFSD10Q14728 455 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 THNSL1Q8IYQ7 743 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 DHX38Q92620 1227 aaKnown RBP19.91■□□□□ 0.78
USP39-201ENST00000323701 ARID3AQ99856 593 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 CDHR5Q9HBB8 845 aa19.91■□□□□ 0.78
USP39-201ENST00000323701 GPR25O00155 361 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 OGTO15294 1046 aa19.9■□□□□ 0.78
USP39-201ENST00000323701 MEFVO15553 781 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms