RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 NPTX2P47972 431 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 CREMQ03060 361 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 HSP90AA2PQ14568 343 aaPredicted RBP19.54■□□□□ 0.72
TPM1-203ENST00000317516 RINT1Q6NUQ1 792 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 FUT10Q6P4F1 479 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 TMC5Q6UXY8 1006 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 PLCD3Q8N3E9 789 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 MMTAG2Q9BU76 263 aaKnown RBP19.54■□□□□ 0.72
TPM1-203ENST00000317516 KMT5AQ9NQR1 393 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 USTQ9Y2C2 406 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 VWA3AA6NCI4 1184 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 TEX28O15482 410 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 RECQL4O94761 1208 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 BMP15O95972 392 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 GLUD1P00367 558 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 SP100P23497 879 aaPredicted RBP19.53■□□□□ 0.72
TPM1-203ENST00000317516 PTPN21Q16825 1174 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 HYIQ5T013 277 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 NT5DC1Q5TFE4 455 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 C15orf39Q6ZRI6 1047 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 HFE2Q6ZVN8 426 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 C1orf186Q6ZWK4 172 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 BMP8AQ7Z5Y6 402 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 GPR149Q86SP6 731 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 GPR62Q9BZJ7 368 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 TNFSF13BQ9Y275 285 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 USP20Q9Y2K6 914 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 GDAQ9Y2T3 454 aa19.53■□□□□ 0.72
TPM1-203ENST00000317516 SF3B1O75533 1304 aaKnown RBP eCLIP19.52■□□□□ 0.729e-6■■■■■ 68.9
TPM1-203ENST00000317516 TMEM221A6NGB7 291 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 M0R296 226 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 SLC26A4O43511 780 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 WEE2P0C1S8 567 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 GUCY2CP25092 1073 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 SMTNP53814 917 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 SIGLEC14Q08ET2 396 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 ELAVL2Q12926 359 aaKnown RBP19.52■□□□□ 0.72
TPM1-203ENST00000317516 EEF1DP3Q658K8 133 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 KANK3Q6NY19 840 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 CYP26C1Q6V0L0 522 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 BRAPQ7Z569 592 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 TDRD5Q8NAT2 981 aaKnown RBP19.52■□□□□ 0.72
TPM1-203ENST00000317516 HDAC7Q8WUI4 952 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 PBXIP1Q96AQ6 731 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 AK8Q96MA6 479 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 MRPL4Q9BYD3 311 aaKnown RBP19.52■□□□□ 0.72
TPM1-203ENST00000317516 KCNH6Q9H252 994 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 KCND2Q9NZV8 630 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 FNIP2Q9P278 1114 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 CDH22Q9UJ99 828 aa19.52■□□□□ 0.72
TPM1-203ENST00000317516 C2CD4DB7Z1M9 353 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 F8W810 466 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 PTGESO14684 152 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 YARSP54577 528 aaKnown RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 KCNK18Q7Z418 384 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 ZDHHC14Q8IZN3 488 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 DAW1Q8N136 415 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 SYT2Q8N9I0 419 aaPredicted RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 CMASQ8NFW8 434 aaPredicted RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 RIN2Q8WYP3 895 aaPredicted RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 RABGGTAQ92696 567 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 ACSF2Q96CM8 615 aaPredicted RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 ACO2Q99798 780 aaKnown RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 NTPCRQ9BSD7 190 aaKnown RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 TCHPQ9BT92 498 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 RUSC1Q9BVN2 902 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 CCDC94Q9BW85 323 aaPredicted RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 PLEKHA4Q9H4M7 779 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 MAN1C1Q9NR34 630 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 TOPORSQ9NS56 1045 aaPredicted RBP19.51■□□□□ 0.71
TPM1-203ENST00000317516 ARHGAP28Q9P2N2 729 aa19.51■□□□□ 0.71
TPM1-203ENST00000317516 CASTOR2A6NHX0 329 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 EDN1P05305 212 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 PDCP20941 246 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 UBA7P41226 1012 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 STRN3Q13033 797 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 PDXDC1Q6P996 788 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 CCDC149Q6ZUS6 474 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 OTOP3Q7RTS5 596 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 SPIRE2Q8WWL2 714 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 CALML4Q96GE6 196 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 TTPALQ9BTX7 342 aa19.5■□□□□ 0.71
TPM1-203ENST00000317516 CCDC195A0A1B0GUA6 201 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 PLA2G4BP0C869 781 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 PLS3P13797 630 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 MTMR3Q13615 1198 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 ZNF568Q3ZCX4 644 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 PALB2Q86YC2 1186 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 SUGP1Q8IWZ8 645 aaKnown RBP19.49■□□□□ 0.71
TPM1-203ENST00000317516 UBALD2Q8IYN6 164 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 KREMEN2Q8NCW0 462 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 UROC1Q96N76 676 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 PNMA5Q96PV4 448 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 PLIN2Q99541 437 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 PAAF1Q9BRP4 392 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 RHOBTB2Q9BYZ6 727 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 SORCS3Q9UPU3 1222 aa19.49■□□□□ 0.71
TPM1-203ENST00000317516 C5orf42Q9H799 3197 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 SFI1A8K8P3 1242 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 H0YCG3 227 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms