RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PAXBP1Q9Y5B6 917 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 A0A0D9SFI3 127 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 KIF2AO00139 706 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-201ENST00000308987 GFRA2O00451 464 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 PFKFB2O60825 505 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 CILPO75339 1184 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 BAG3O95817 575 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 CHGBP05060 677 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 CYP2D6P10635 497 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 CPA1P15085 419 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 EIF4BP23588 611 aaKnown RBP5.56□□□□□ -1.52
CKS1B-201ENST00000308987 ADORA2AP29274 412 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 CNGA1P29973 690 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 ADCYAP1R1P41586 468 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 FAM193AP78312 1265 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 TEKQ02763 1124 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 TLE2Q04725 743 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 RTP5Q14D33 572 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 LRRC41Q15345 812 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 CERKLQ49MI3 558 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-201ENST00000308987 FAM47AQ5JRC9 791 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 WDR78Q5VTH9 848 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 MFSD14CQ5VZR4 134 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 FAM129CQ86XR2 697 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 MAGEB6Q8N7X4 407 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 LINC01356Q8N9X3 169 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 TP53I13Q8NBR0 393 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-201ENST00000308987 SLC44A5Q8NCS7 719 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 MAFAQ8NHW3 353 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-201ENST00000308987 FERMT2Q96AC1 680 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 FAM227BQ96M60 508 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF396Q96N95 335 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-201ENST00000308987 NEK1Q96PY6 1258 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 HELLSQ9NRZ9 838 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 DACT1Q9NYF0 836 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 SERPINB13Q9UIV8 391 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 LRRC37A2A6NM11 1700 aa5.56□□□□□ -1.52
CKS1B-201ENST00000308987 PIEZO1Q92508 2521 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 WDR87Q6ZQQ6 2873 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 TCRBV5S4A2TA0A5A2 114 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 SEPT4O43236 478 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 AP5Z1O43299 807 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 LRRN2O75325 713 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 IDH1O75874 414 aaKnown RBP5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ERCC3P19447 782 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 KCNJ6P48051 423 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF165P49910 485 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 CDR1P51861 262 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 EVCP57679 992 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 CCNA1P78396 465 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 IQCB1Q15051 598 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 STX1AQ16623 288 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 CLEC16AQ2KHT3 1053 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ABCB5Q2M3G0 1257 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 LRRFIP1Q32MZ4 808 aaKnown RBP5.55□□□□□ -1.52
CKS1B-201ENST00000308987 MCMDC2Q4G0Z9 681 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ANO6Q4KMQ2 910 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 OLFML2BQ68BL8 750 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 SLC6A19Q695T7 634 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 CCAR1Q8IX12 1150 aaKnown RBP5.55□□□□□ -1.52
CKS1B-201ENST00000308987 NECAB1Q8N987 351 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 FAM13CQ8NE31 585 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 MZB1Q8WU39 189 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ATG4CQ96DT6 458 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF274Q96GC6 653 aaPredicted RBP5.55□□□□□ -1.52
CKS1B-201ENST00000308987 MAML3Q96JK9 1138 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 HAUS7Q99871 368 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 LBHD1Q9BQE6 289 aaPredicted RBP5.55□□□□□ -1.52
CKS1B-201ENST00000308987 NOL10Q9BSC4 688 aaKnown RBP5.55□□□□□ -1.52
CKS1B-201ENST00000308987 G6PC3Q9BUM1 346 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 DSCC1Q9BVC3 393 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 TRIM5Q9C035 493 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 SPATC1LQ9H0A9 340 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 FBXO28Q9NVF7 368 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ANO10Q9NW15 660 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 PYCARDQ9ULZ3 195 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF281Q9Y2X9 895 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 MYO7AQ13402 2215 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 MUC6Q6W4X9 2439 aa5.55□□□□□ -1.52
CKS1B-201ENST00000308987 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 A0A1W2PQ27 194 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 A0A1W2PQ64 194 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 A0A1W2PQD8 194 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 GOLGA6L19H0YKK7 550 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 H3BQV1 296 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 ADCY6O43306 1168 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 MSCO60682 206 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 KIF20AO95235 890 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 PGK1P00558 417 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 HLA-DOAP06340 250 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 AKR1B1P15121 316 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 PLCG1P19174 1290 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 SDHBP21912 280 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 PTGS1P23219 599 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 USP14P54578 494 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 GSDMDP57764 484 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 YBX1P67809 324 aaKnown RBP5.54□□□□□ -1.52
CKS1B-201ENST00000308987 SMAD3P84022 425 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms