RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 CLRN2A0PK11 232 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 RPL21P46778 160 aaKnown RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 ALDH5A1P51649 535 aaPredicted RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 EPC2Q52LR7 807 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 KLF6Q99612 283 aaPredicted RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 TTYH3Q9C0H2 523 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 NEU2Q9Y3R4 380 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 ZNF335Q9H4Z2 1342 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 SRRM3A6NNA2 597 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 LPXNO60711 386 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 MARK3P27448 753 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 PGM1P36871 562 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 EPHB1P54762 984 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ITPK1Q13572 414 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ERMARDQ5T6L9 678 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 CRLF3Q8IUI8 442 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 PRCCQ92733 491 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 PGM2Q96G03 612 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 BCAP29Q9UHQ4 241 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ALDH1B1P30837 517 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 FLT3P36888 993 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 FNTAP49354 379 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 YWHAEP62258 255 aaKnown RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 PSMC6P62333 389 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 MRPS35P82673 323 aaKnown RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 DDR1Q08345 913 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 NFIXQ14938 502 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ATG16L1Q676U5 607 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 TTC16Q8NEE8 873 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ATP8B4Q8TF62 1192 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 NAF1Q96HR8 494 aaKnown RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 CASQ2O14958 399 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 RIPK2O43353 540 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 KRT37O76014 449 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 NCF2P19878 526 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 DRD4P21917 467 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 KLHL38Q2WGJ6 581 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 SLC20A1Q8WUM9 679 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ATP6V0A1Q93050 837 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 PPP1R12AO14974 1030 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 TBX3O15119 743 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 CCDC22O60826 627 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 TEX9Q8N6V9 391 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ATP11CQ8NB49 1132 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 AGPAT3Q9NRZ7 376 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 NDE1Q9NXR1 346 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 NXF1Q9UBU9 619 aaKnown RBP11.7□□□□□ -0.54
CCDC170-201ENST00000239374 ATRNO75882 1429 aa11.7□□□□□ -0.54
CCDC170-201ENST00000239374 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 TRPA1O75762 1119 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 HSP90AA5PQ58FG0 334 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 LMBRD2Q68DH5 695 aaPredicted RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 PPM1NQ8N819 430 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 AGAP11Q8TF27 550 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 COA1Q9GZY4 146 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 TUFT1Q9NNX1 390 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 PHTF1Q9UMS5 762 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 G3BP2Q9UN86 482 aaKnown RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 PSMA2P25787 234 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 PPP4CP60510 307 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 HIF1AQ16665 826 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 RINT1Q6NUQ1 792 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 MIGA2Q7L4E1 593 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 ERICH1Q86X53 443 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 PIP4K2CQ8TBX8 421 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 OSBPL8Q9BZF1 889 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 KCNA3P22001 575 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 ARL1P40616 181 aaPredicted RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 SCARA5Q6ZMJ2 495 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 RHPN2Q8IUC4 686 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 SCFD2Q8WU76 684 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 SLC35C1Q96A29 364 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 MMTAG2Q9BU76 263 aaKnown RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 CNOT7Q9UIV1 285 aaKnown RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 MYBL1P10243 752 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 KDSRQ06136 332 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 TMEM119Q4V9L6 283 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 CEP55Q53EZ4 464 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 MDH1BQ5I0G3 518 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
CCDC170-201ENST00000239374 LVRNQ6Q4G3 990 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 CDKL2Q92772 493 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 NUF2Q9BZD4 464 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 RXFP1Q9HBX9 757 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 COMMD10Q9Y6G5 202 aa11.69□□□□□ -0.54
CCDC170-201ENST00000239374 O00370 1275 aa11.68□□□□□ -0.54
CCDC170-201ENST00000239374 EIF3DO15371 548 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC170-201ENST00000239374 TLR2O60603 784 aa11.68□□□□□ -0.54
CCDC170-201ENST00000239374 TNNC2P02585 160 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms