RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 PHF20Q9BVI0 1012 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 NT5C3AQ9H0P0 336 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 UNC45AQ9H3U1 944 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 SMOC1Q9H4F8 434 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 HEBP1Q9NRV9 189 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 SUCLA2Q9P2R7 463 aaPredicted RBP9.33□□□□□ -0.92
IFT43-201ENST00000238628 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
IFT43-201ENST00000238628 CDH7Q9ULB5 785 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 SSX2IPQ9Y2D8 614 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 MSRB2Q9Y3D2 182 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 PCDHB2Q9Y5E7 798 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 NBEAQ8NFP9 2946 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 IGSF10Q6WRI0 2623 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 IGKV6-21A0A0C4DH24 114 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 TMEM150BA6NC51 233 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 C4orf47A7E2U8 309 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 DDX11L8A8MPP1 907 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 NRP1O14786 923 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
IFT43-201ENST00000238628 MAFO75444 373 aaPredicted RBP9.32□□□□□ -0.92
IFT43-201ENST00000238628 SOD2P04179 222 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 CEACAM1P13688 526 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 RCAN1P53805 252 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 SATB1Q01826 763 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 AKAP17AQ02040 695 aaKnown RBP9.32□□□□□ -0.92
IFT43-201ENST00000238628 ADCK5Q3MIX3 580 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 LRCH2Q5VUJ6 765 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 LARP1BQ659C4 914 aaKnown RBP9.32□□□□□ -0.92
IFT43-201ENST00000238628 AGMOQ6ZNB7 445 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 MRPL10Q7Z7H8 261 aaKnown RBP9.32□□□□□ -0.92
IFT43-201ENST00000238628 KSR1Q8IVT5 923 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 SLC5A5Q92911 643 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 GJA10Q969M2 543 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 LOXL4Q96JB6 756 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 NLRP4Q96MN2 994 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 CEP89Q96ST8 783 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 HNRNPABQ99729 332 aaKnown RBP9.32□□□□□ -0.92
IFT43-201ENST00000238628 KXD1Q9BQD3 176 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 MKNK1Q9BUB5 465 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 RSAD1Q9HA92 442 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 LMAN1LQ9HAT1 526 aa9.32□□□□□ -0.92
IFT43-201ENST00000238628 TDRD15B5MCY1 1934 aaKnown RBP9.31□□□□□ -0.92
IFT43-201ENST00000238628 F5P12259 2224 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 MAN2B1O00754 1011 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 TEX28O15482 410 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 EDIL3O43854 480 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 B4GALT3O60512 393 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 EPN2O95208 641 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 STBD1O95210 358 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 POMCP01189 267 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 URODP06132 367 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 AFF1P51825 1210 aaKnown RBP9.31□□□□□ -0.92
IFT43-201ENST00000238628 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 TAS1R1Q7RTX1 841 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 RASEFQ8IZ41 740 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 CCDC148Q8NFR7 591 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 RDM1Q8NG50 284 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 HNRNPLLQ8WVV9 542 aaKnown RBP9.31□□□□□ -0.92
IFT43-201ENST00000238628 LRIG1Q96JA1 1093 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 RPS6KC1Q96S38 1066 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 JPH2Q9BR39 696 aaPredicted RBP9.31□□□□□ -0.92
IFT43-201ENST00000238628 EDEM2Q9BV94 578 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 PRKD2Q9BZL6 878 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 PLEKHA4Q9H4M7 779 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 ZDHHC7Q9NXF8 308 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 DOCK6Q96HP0 2047 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
IFT43-201ENST00000238628 BPTFQ12830 3046 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 DMXL2Q8TDJ6 3036 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 SMG1Q96Q15 3661 aaKnown RBP9.3□□□□□ -0.92
IFT43-201ENST00000238628 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
IFT43-201ENST00000238628 PSMD10O75832 226 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 PRB1P04280 392 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 HMGB1P09429 215 aaKnown RBP9.3□□□□□ -0.92
IFT43-201ENST00000238628 SRGAP2CP0DJJ0 459 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 OR1G1P47890 313 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 KRT32Q14532 448 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 Q4G0T1 1027 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 Q6ZUG5 572 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 SRGAP1Q7Z6B7 1085 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 GRASPQ7Z6J2 395 aaPredicted RBP9.3□□□□□ -0.92
IFT43-201ENST00000238628 PALB2Q86YC2 1186 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 CNNM3Q8NE01 707 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 HDAC7Q8WUI4 952 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 FGF13Q92913 245 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 YTHDC1Q96MU7 727 aaKnown RBP9.3□□□□□ -0.92
IFT43-201ENST00000238628 HERC2P3Q9BVR0 1158 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 IFT122Q9HBG6 1241 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 UBN1Q9NPG3 1134 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 VPS45Q9NRW7 570 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 AGPAT5Q9NUQ2 364 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 PRG3Q9Y2Y8 225 aaPredicted RBP9.3□□□□□ -0.92
IFT43-201ENST00000238628 COL4A3BPQ9Y5P4 624 aa9.3□□□□□ -0.92
IFT43-201ENST00000238628 AKAP13Q12802 2813 aa9.29□□□□□ -0.92
IFT43-201ENST00000238628 SHISA7A6NL88 538 aa9.29□□□□□ -0.92
IFT43-201ENST00000238628 NR1I2O75469 434 aa9.29□□□□□ -0.92
IFT43-201ENST00000238628 ITGA4P13612 1032 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms