RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 VCAM1P19320 739 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 SCNN1DP51172 638 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 TMEM62Q0P6H9 643 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 DHX34Q14147 1143 aaKnown RBP15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 QRICH1Q2TAL8 776 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 ASPRV1Q53RT3 343 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 ZNF804AQ7Z570 1209 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 ERMNQ8TAM6 284 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 SEC14L1Q92503 715 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 SPOCK2Q92563 424 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 BICD1Q96G01 975 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 STMN4Q9H169 189 aaPredicted RBP15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 RABGAP1Q9Y3P9 1069 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 FAM200BP0CF97 657 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 DESP17661 470 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 JAM2P57087 298 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 PPATQ06203 517 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 TCP10Q12799 353 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 COL23A1Q86Y22 540 aaPredicted RBP15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 PPFIBP2Q8ND30 876 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 SLC30A5Q8TAD4 765 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 INTS2Q9H0H0 1204 aaKnown RBP15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 BLOC1S6Q9UL45 172 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 TRAF3IP3Q9Y228 551 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 FRMD4BQ9Y2L6 1034 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 LRRC42Q9Y546 428 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 ZBTB5O15062 677 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 EPHB2P29323 1055 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 GCLMP48507 274 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 MCL1Q07820 350 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 ZRSR2Q15696 482 aaKnown RBP15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 OLFML2BQ68BL8 750 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 HS2ST1Q7LGA3 356 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 LINC00116Q8NCU8 138 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 MIPOL1Q8TD10 442 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 PITPNM3Q9BZ71 974 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 MTUS1Q9ULD2 1270 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 ANKRD62A6NC57 917 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 CCDC160A6NGH7 325 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 GNPATO15228 680 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 TGFB1I1O43294 461 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 TPBGLP0DKB5 382 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 CHRNA3P32297 505 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 PTGIRP43119 386 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 CACNB3P54284 484 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 ARHGAP4P98171 946 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 MYL7Q01449 175 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 DNAJC3Q13217 504 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 PHLDB3Q6NSJ2 640 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 CYP4X1Q8N118 509 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 CRAMP1Q96RY5 1269 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 STK33Q9BYT3 514 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 TXLNGQ9NUQ3 528 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 NKIRAS1Q9NYS0 192 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 DDX39AO00148 427 aaKnown RBP15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 GTF2IP78347 998 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 KRT17Q04695 432 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 MTM1Q13496 603 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 TMED2Q15363 201 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 RXFP1Q9HBX9 757 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 CYP39A1Q9NYL5 469 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 LNPEPQ9UIQ6 1025 aa15.1■□□□□ 0.01
PCDHB3-201ENST00000231130 PASKQ96RG2 1323 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 A0A0A6YYK5 440 aaPredicted RBP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 HNRNPRO43390 633 aaKnown RBP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 PIAS1O75925 651 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 TTLL1O95922 423 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 COILP38432 576 aaPredicted RBP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 ADCY8P40145 1251 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 CCNFP41002 786 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 MAGEA8P43361 318 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 LBRQ14739 615 aaKnown RBP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 EPC2Q52LR7 807 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 SGO2Q562F6 1265 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 FAM182BQ5T319 152 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 DTNBP1Q96EV8 351 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 AGPAT1Q99943 283 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 POC1B-GALNT4F8VUJ3 575 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 ZNF189O75820 626 aaPredicted RBP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 HNRNPCP07910 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 SPATA31C1P0DKV0 1188 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 RARGP13631 454 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 DLG4P78352 724 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 ORC2Q13416 577 aaPredicted RBP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 TMED1Q13445 227 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 MYBPC3Q14896 1274 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 RNF207Q6ZRF8 634 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 PTF1AQ7RTS3 328 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 HIC2Q96JB3 615 aa15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.09■□□□□ 0.01
PCDHB3-201ENST00000231130 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 WDR91A4D1P6 747 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 FAM86B1E9PN63 330 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 UBAP1LF5GYI3 381 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 EML1O00423 815 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 PODXLO00592 558 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 PEX11AO75192 247 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms