RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm45208A0A140LJ36 292 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Bace1P56818 501 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Arl4aP61213 200 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Lilrb4Q64281 335 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Iqcf1Q9D9K8 182 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Abcb11Q9QY30 1321 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Sipa1l2Q80TE4 1722 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 ItkQ03526 625 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Nudt16Q6P3D0 195 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Slc6a16A0A1L1SR47 742 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Lrrc23O35125 340 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Igfbp4P47879 254 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Wfs1P56695 890 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Edem3Q2HXL6 931 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Pid1Q3UBG2 217 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Myo6Q64331 1265 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ttc16Q8C1F5 767 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tlr2Q9QUN7 784 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Gm9774A0A0A6YVU8 407 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 JrklB2RRL2 523 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Myo1gQ5SUA5 1024 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 FancbQ5XJY6 703 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tll1Q62381 1013 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Siglec10Q80ZE3 688 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Q8VDP2 222 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Zmynd10Q99ML0 440 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 1700129C05RikQ9CQ77 218 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Taf7lQ9D3R9 471 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Slc8a3S4R2P9 928 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tmprss11aQ3UQ41 389 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 4933427I04RikQ3V053 235 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Gm14685Q52KH6 695 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tas2r134Q7TQB0 298 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ildr1Q8CBR1 537 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Nkiras1Q8CEC5 192 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Phc3Q8CHP6 981 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Gnl3Q8CI11 538 aaKnown RBP16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Lgi2Q8K4Z0 550 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Vwa5aQ99KC8 793 aaKnown RBP16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Borcs6Q9D6W8 360 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Chd2E9PZM4 1827 aaKnown RBP16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Mdm4O35618 489 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 IkbkgO88522 412 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Rbm46P86049 533 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Sco1Q5SUC9 284 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Klra5Q60652 266 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Klhl14Q69ZK5 630 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Dpp9Q8BVG4 862 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Arhgap29Q8CGF1 1266 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ppp4r1Q8K2V1 951 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Wrap53Q8VC51 532 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Pex19Q8VCI5 299 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 HlcsQ920N2 722 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Emc2Q9CRD2 297 aa16.49■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Gm28360A0A087WR25 190 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 SftpbP50405 377 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Srrm1Q52KI8 946 aaKnown RBP16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Coro7Q9D2V7 922 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 PrameQ9D4Z5 464 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Myo1eE9Q634 1107 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Exoc7O35250 697 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Timm44O35857 452 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Taf1bP97358 586 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ect2Q07139 913 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Fam118bQ8C569 351 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Apol9bQ8C7I4 310 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Dact1Q8R4A3 778 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Apol9aQ8VDU3 310 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 IrgqQ8VIM9 583 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ttc33Q9D6K7 262 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Vmn2r87E9PZX4 848 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Gm3095E9Q058 166 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Casp2P29594 452 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Sh3tc2Q80VA5 1289 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Pak4Q8BTW9 593 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 PigoQ9JJI6 1093 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Foxn2E9Q7L6 429 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Psmc1P62192 440 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 PrkcbP68404 671 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Best3Q6H1V1 669 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 PrcpQ7TMR0 491 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Wbp11Q923D5 641 aaKnown RBP16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Trim7Q923T7 510 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tmem39aQ9CYC3 486 aa16.48■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Myo5bP21271 1818 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Papd5Q68ED3 633 aaKnown RBP16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Znf280dQ68FE8 974 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Anapc5Q8BTZ4 740 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Pdik1lQ8QZR7 341 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Cttnbp2nlQ99LJ0 638 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tdrd1Q99MV1 1172 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tmem206Q9D771 350 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Fmnl1Q9JL26 1094 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 GgcxQ9QYC7 757 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Klra7Q60654 280 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Armcx2Q6A058 784 aaKnown RBP16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Antxr2Q6DFX2 487 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ssxb10Q6XAR7 170 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Zbed4Q80WQ9 1168 aa16.47■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 EmsyQ8BMB0 1264 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms