RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Smc1bQ920F6 1248 aa22.87■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Q9D2Q3 444 aa22.87■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Tpcn1Q9EQJ0 817 aa22.87■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Cpsf3Q9QXK7 684 aa22.87■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Cdr2lA2A6T1 465 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Vmn2r87E9PZX4 848 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Plekha5E9Q6H8 1269 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Gm10801F7C7Q0 168 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 4930544D05RikJ3QK56 214 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 DtnbO70585 659 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Tap2P36371 702 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 RimklbQ80WS1 387 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Gfpt2Q9Z2Z9 682 aa22.86■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Btnl4A2CG29 586 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Kcnu1O54982 1121 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Asprv1Q09PK2 339 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Trim65Q8BFW4 522 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Pkn2Q8BWW9 983 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Zc3h6Q8BYK8 1177 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Ca9Q8VHB5 437 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 AclyQ91V92 1091 aaKnown RBP22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Dnajb2Q9QYI5 324 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Hexim2Q3TVI4 313 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Fam198aQ3UY90 562 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Rhox12Q4TU81 186 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Taf3Q5HZG4 932 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Sema4bQ62179 823 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Zcchc2Q69ZB8 1166 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Ttc7aQ8BGB2 858 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Gpc2Q8BKV1 579 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Nmrk1Q91W63 195 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Elf2Q9JHC9 593 aa22.85■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Osbpl7A2A716 963 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Tmem265E9Q8G3 109 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Arf4P61750 180 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Spink5Q148R4 1017 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 SpoplQ2M2N2 392 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Hspa4Q61316 841 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Git1Q68FF6 770 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Calml4Q91WQ9 153 aa22.84■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 1700064H15RikD3Z4D4 81 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 SprtnG3X912 497 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Hoxc8P09025 242 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 GlrbP48168 496 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Gad1P48318 593 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Myo1fP70248 1099 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Muc3aQ3U5A2 218 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Ccdc42Q5SV66 316 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Olfr392Q7TRX6 312 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Ush1gQ80T11 461 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 4933409G03RikQ8C5U0 320 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Ero1aQ8R180 464 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Ap3m2Q8R2R9 418 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 TtpalQ9D3D0 343 aa22.83■■□□□ 1.25
Ccdc88a-202ENSMUST00000109477 Ttll8A4Q9F1 832 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 DgkhD3YXJ0 1156 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Gm8909G3UXE9 396 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ms4a1P19437 291 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Scarf2P59222 833 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Oas1fQ14AZ4 364 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Elf1Q60775 612 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Luc7lQ9CYI4 371 aaKnown RBP22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Wdr72D3YYM4 1114 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Trim30aP15533 496 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Gja8P28236 440 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Fads2p1Q0VAX3 487 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Sh3gl1Q62419 368 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Tas2r134Q7TQB0 298 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Rint1Q8BZ36 792 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Kat5Q8CHK4 513 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Tbc1d13Q8R3D1 400 aa22.82■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 DgkkE9Q7N4 1118 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Vmn2r15L7N2A0 855 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Cyp2c38P56655 490 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Btbd1P58544 488 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Phactr1Q2M3X8 580 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Mfhas1Q3V1N1 1048 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Rpf1Q7TND5 349 aaKnown RBP22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ctdp1Q7TSG2 960 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Suz12Q80U70 741 aaKnown RBP22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Gjc2Q8BQU6 440 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Otud6bQ8K2H2 294 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Tlr3Q99MB1 905 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Rpf2Q9JJ80 306 aaKnown RBP22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 HttP42859 3119 aa22.81■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ankrd16A2AS55 361 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Gm10110D3Z5M2 615 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Gm17535J3KMR8 224 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Aoc3O70423 765 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 SqleP52019 572 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Znf865Q3U3I9 1058 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Tspan18Q80WR1 248 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 NrcamQ810U4 1256 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Depdc1bQ8BH88 529 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 B3glctQ8BHT6 489 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Q922R1 422 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ergic2Q9CR89 377 aa22.8■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 MycP01108 439 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 IapP03975 557 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Pla2g4aP47713 748 aa22.79■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms